Projects

All the projects in the ModEncode consortium.
Chromatin Function Chromosomal Proteins
Histone Variants Origins of Replication
Regulatory Elements in C. elegans Regulatory Elements in Drosophila
Small and microRNAs The 3' UTRome
The C. elegans Transcriptome The Drosophila Transcriptome

Submissions

5 most recent submissions:
Celniker embryonic 5'RACE 2008-06-11
DMG2 RTPCR 2008-06-09
Fly Worm All submissions

Templates

Templates are predefined queries, each has a simple form and a description. You can edit templates in the QueryBuilder, if you log in you can create new templates yourself.
Example templates (57 total):
 

Lists

You can run queries on whole lists of data. Create lists from the results of a query or by uploading identifiers. Click on a list to view graphs and summaries in a list analysis page, if you log in you can save lists permanently.


Example lists (27 total):
 
 

Query Builder

You can use the flexible query interface to construct your own data mining queries. A good way to start is by editing an existing template.


Start a query from:  Gene,  Protein
 




modMine is funded by the NIH