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Author :

Name  Stark A

28 Publications

First Author Title Year Journal Volume Pages PubMed ID
Hilgers V Neural-specific elongation of 3' UTRs during Drosophila development. 2011 Proc Natl Acad Sci U S A 108 15864-9 21896737
Handler D A systematic analysis of Drosophila TUDOR domain-containing proteins identifies Vreteno and the Tdrd12 family as essential primary piRNA pathway factors. 2011 EMBO J 30 3977-93 21863019
Arnold CD Genome-wide quantitative enhancer activity maps identified by STARR-seq. 2013 Science 339 1074-7 23328393
Czech B An endogenous small interfering RNA pathway in Drosophila. 2008 Nature 453 798-802 18463631
Malone CD Specialized piRNA pathways act in germline and somatic tissues of the Drosophila ovary. 2009 Cell 137 522-35 19395010
Brennecke J An epigenetic role for maternally inherited piRNAs in transposon silencing. 2008 Science 322 1387-92 19039138
Ruby JG Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs. 2007 Genome Res 17 1850-64 17989254
Stark A Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes. 2007 Genome Res 17 1865-79 17989255
Bushati N Temporal reciprocity of miRNAs and their targets during the maternal-to-zygotic transition in Drosophila. 2008 Curr Biol 18 501-6 18394895
Stark A Animal MicroRNAs confer robustness to gene expression and have a significant impact on 3'UTR evolution. 2005 Cell 123 1133-46 16337999
Brennecke J Principles of microRNA-target recognition. 2005 PLoS Biol 3 e85 15723116
Stark A Identification of Drosophila MicroRNA targets. 2003 PLoS Biol 1 E60 14691535
Behm-Ansmant I mRNA degradation by miRNAs and GW182 requires both CCR4:NOT deadenylase and DCP1:DCP2 decapping complexes. 2006 Genes Dev 20 1885-98 16815998
Rehwinkel J Genome-wide analysis of mRNAs regulated by Drosha and Argonaute proteins in Drosophila melanogaster. 2006 Mol Cell Biol 26 2965-75 16581772
Schnorrer F Systematic genetic analysis of muscle morphogenesis and function in Drosophila. 2010 Nature 464 287-91 20220848
Zeitlinger J Whole-genome ChIP-chip analysis of Dorsal, Twist, and Snail suggests integration of diverse patterning processes in the Drosophila embryo. 2007 Genes Dev 21 385-90 17322397
Kvon EZ HOT regions function as patterned developmental enhancers and have a distinct cis-regulatory signature. 2012 Genes Dev 26 908-13 22499593
Stark A Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures. 2007 Nature 450 219-32 17994088
Stark A A single Hox locus in Drosophila produces functional microRNAs from opposite DNA strands. 2008 Genes Dev 22 8-13 18172160
Brennecke J Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila. 2007 Cell 128 1089-103 17346786
Brennecke J bantam encodes a developmentally regulated microRNA that controls cell proliferation and regulates the proapoptotic gene hid in Drosophila. 2003 Cell 113 25-36 12679032
Cohen SM Denoising feedback loops by thresholding--a new role for microRNAs. 2006 Genes Dev 20 2769-72 17043305
Yáñez-Cuna JO Uncovering cis-regulatory sequence requirements for context-specific transcription factor binding. 2012 Genome Res 22 2018-30 22534400
Zeitlinger J RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo. 2007 Nat Genet 39 1512-6 17994019
He Q High conservation of transcription factor binding and evidence for combinatorial regulation across six Drosophila species. 2011 Nat Genet 43 414-20 21478888
Kheradpour P Reliable prediction of regulator targets using 12 Drosophila genomes. 2007 Genome Res 17 1919-31 17989251
Clark AG Evolution of genes and genomes on the Drosophila phylogeny. 2007 Nature 450 203-18 17994087
Rembold M A conserved role for Snail as a potentiator of active transcription. 2014 Genes Dev 28 167-81 24402316