modENCODE |  Help |  blog

Protein Domain : IPR005147

Name  tRNA synthetase, B5-domain Short Name  tRNA_synthase_B5-dom
Type  Domain Description  Domain B5 is found in phenylalanine-tRNA synthetase beta subunits. This domain has been shown to bind DNA through a winged helix-turn-helix motif []. Phenylalanine-tRNA synthetase may influence common cellular processes via DNA binding, in addition to its aminoacylation function.

Publication Counts Displayer

0 Child Features

1 Contains

DB identifier Name Short Name Type
IPR009061 DNA binding domain, putative DNA-bd_dom_put Domain

4 Cross References

Identifier
Source . Name

Subject . Primary Identifier
PF03484 PFAM IPR005147
PS51483 PROFILE IPR005147
SM00874 SMART IPR005147
G3DSA:3.30.56.20 GENE3D IPR005147

3 Data Sets

Name URL
TrEMBL data set http://www.ebi.ac.uk/trembl/
InterPro data set  
InterPro GO Annotation data set  

2 Found In

DB identifier Name Short Name Type
IPR004531 Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic Phe-tRNA-synth_IIc_bsu_arc Family
IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit Phe-tRNA-ligase_IIc_bsu Family

4 GO Annotation


Subject . Secondary Identifier

Subject . Name

Subject . Symbol

Ontology Term . Identifier

Ontology Term . Name
tRNA synthetase, B5-domain   GO:0000287 magnesium ion binding
tRNA synthetase, B5-domain   GO:0003723 RNA binding
tRNA synthetase, B5-domain   GO:0005524 ATP binding
tRNA synthetase, B5-domain   GO:0006432 phenylalanyl-tRNA aminoacylation

4 Ontology Annotations


Subject . Secondary Identifier

Subject . Name

Subject . Symbol

Ontology Term . Identifier

Ontology Term . Name
tRNA synthetase, B5-domain   GO:0000287 magnesium ion binding
tRNA synthetase, B5-domain   GO:0003723 RNA binding
tRNA synthetase, B5-domain   GO:0005524 ATP binding
tRNA synthetase, B5-domain   GO:0006432 phenylalanyl-tRNA aminoacylation

0 Parent Features

11 Proteins

DB identifier Primary Accession
Organism . Name
FBpp0084021 Q9VCA5 Drosophila melanogaster
FBpp0281982 Q298I1 Drosophila pseudoobscura
FBpp0172634 B4K7G4 Drosophila mojavensis
FBpp0225039 B4M5Q8 Drosophila virilis
FBpp0255824 B4PKZ2 Drosophila yakuba
A8WNF7_CAEBR A8WNF7 Caenorhabditis briggsae
H2VHN9_CAEJA H2VHN9 Caenorhabditis japonica
G0PJT7_CAEBE G0PJT7 Caenorhabditis brenneri
G0N442_CAEBE G0N442 Caenorhabditis brenneri
SYFB_CAEEL Q19713 Caenorhabditis elegans
E3LGI7_CAERE E3LGI7 Caenorhabditis remanei