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Protein Domain : IPR009061

Name  DNA binding domain, putative Short Name  DNA-bd_dom_put
Type  Domain Description  A putative DNA-binding domain with a conserved structure is found in several different protein families. The core structure of the domain consists of a three-helical fold that is architecturally similar to that of the "winged-helix" fold, but is topologically distinct. Representatives of this domain can be found in domains B1 and B5 from the beta subunit of phenylalanine-tRNA synthetases [], the C-terminal region of the DNA/RPA-binding domain of the DNA excision repair factor XPA [], the N-terminal domain of the transcriptional activators BmrR and MtaN [], the most conserved domain of the retinal development protein Dachshund [], and the DNA-binding domain of the gpNU1 subunit from the bacteriophage lambda viral packing protein terminase [].

Publication Counts Displayer

4 Child Features

DB identifier Name Short Name Type
IPR022656 XPA C- terminal XPA_C Domain
IPR003380 Transforming protein Ski Transform_Ski Domain
IPR000551 MerR-type HTH domain MerR-type_HTH_dom Domain
IPR012884 Excisionase-like Excisionase-like Domain

2 Contains

DB identifier Name Short Name Type
IPR022658 XPA, conserved site XPA_CS Conserved_site
IPR015358 Transcription regulator MerR, DNA binding Tscrpt_reg_MerR_DNA-bd Domain

1 Cross References

Identifier
Source . Name

Subject . Primary Identifier
SSF46955 SSF IPR009061

2 Data Sets

Name URL
TrEMBL data set http://www.ebi.ac.uk/trembl/
InterPro data set  

7 Found In

DB identifier Name Short Name Type
IPR000465 XPA XPA Family
IPR004531 Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic Phe-tRNA-synth_IIc_bsu_arc Family
IPR005147 tRNA synthetase, B5-domain tRNA_synthase_B5-dom Domain
IPR010749 Protein of unknown function DUF1323 DUF1323 Family
IPR010906 Bacteriophage lambda, Nu1, terminase small subunit Phage_lambda_Nu1_terminase-ssu Family
IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit Phe-tRNA-ligase_IIc_bsu Family
IPR003314 Transposase MuA/Repressor CI, DNA-binding MuA/CI_DNA-bd Domain

0 GO Annotation

0 Ontology Annotations

0 Parent Features

67 Proteins

DB identifier Primary Accession
Organism . Name
FBpp0070638 P28518 Drosophila melanogaster
FBpp0086958 A1Z936 Drosophila melanogaster
FBpp0086957 A1Z935 Drosophila melanogaster
FBpp0290551 Q1RKX1 Drosophila melanogaster
FBpp0290550 D1YSG4 Drosophila melanogaster
FBpp0084021 Q9VCA5 Drosophila melanogaster
FBpp0080435 Q8IP20 Drosophila melanogaster
FBpp0080432 Q9VJK6 Drosophila melanogaster
FBpp0080433 Q8IP19 Drosophila melanogaster
FBpp0099813 Q59DY9 Drosophila melanogaster
FBpp0099814 Q59DZ0 Drosophila melanogaster
FBpp0080434 Q8IP21 Drosophila melanogaster
FBpp0111629 Q00G30 Drosophila melanogaster
FBpp0281982 Q298I1 Drosophila pseudoobscura
FBpp0277251 Q293E7 Drosophila pseudoobscura
FBpp0279764 Q29LR5 Drosophila pseudoobscura
FBpp0280602 Q29MB9 Drosophila pseudoobscura
FBpp0285234 Q29I43 Drosophila pseudoobscura
FBpp0163041 B4KKT0 Drosophila mojavensis
FBpp0163321 B4L7D5 Drosophila mojavensis
FBpp0165368 B4L6M6 Drosophila mojavensis
FBpp0166258 B4KHH8 Drosophila mojavensis
FBpp0167703 B4KSP8 Drosophila mojavensis
FBpp0172634 B4K7G4 Drosophila mojavensis
FBpp0225039 B4M5Q8 Drosophila virilis
FBpp0230845 B4M7L9 Drosophila virilis
FBpp0231870 B4LVL5 Drosophila virilis
FBpp0235765 B4LP84 Drosophila virilis
FBpp0239123 B4LTX7 Drosophila virilis
FBpp0255824 B4PKZ2 Drosophila yakuba