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Gene : RpS16 D. melanogaster

DB identifier  ? FBgn0034743 Secondary Identifier  ? CG4046
Name  ? Ribosomal protein S16 Source  FlyBase
  • synonyms:
  • Rp S16,
  • FBgn0034743,
  • S16,
  • bs32d05.y1,
  • CG4046,
  • FBan0004046

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5 Alleles

DB identifier Symbol Allele Class Organism
FBal0287034 RpS16[Scer\UAS.ORF]   Drosophila melanogaster
FBal0287035 RpS16[Scer\UAS.ORF.T:Ivir\HA1]   Drosophila melanogaster
FBal0208372 RpS16[GD10510]   Drosophila melanogaster
FBal0235735 RpS16[KK108679]   Drosophila melanogaster
FBal0274070 RpS16[NIG.4046R]   Drosophila melanogaster

711 Clones

Secondary Identifier DB identifier
EK092410 FBcl0037928
UUGC0173 FBcl0001293
ESG0118a.B21_G04 FBcl0003013
ESG018a.E21_F02 FBcl0003925
UUGC1143 FBcl0006063
ESG011b.E7_G12 FBcl0010857
EK093925 FBcl0038310
EK087843 FBcl0038336
EK188847 FBcl0038506
EK259947 FBcl0038622
EK057040 FBcl0038634
EK090709 FBcl0038674
EK215031 FBcl0038712
bs71f11 FBcl0052769
bs32d05 FBcl0052975
bs10b07 FBcl0052979
EC01049 FBcl0065735
EC36570 FBcl0068505
EC01204 FBcl0068539
EC43825 FBcl0068549
EC36725 FBcl0068657
EC00895 FBcl0068659
EC37432 FBcl0068661
EC27340 FBcl0068665
EC00495 FBcl0068713
EC39221 FBcl0068715
EC38911 FBcl0068719
EC01349 FBcl0068743
EC22215 FBcl0068745
EC33987 FBcl0068767

7 Exons

DB identifier Symbol
FBgn0034743:3 RpS16:3
FBgn0034743:4 RpS16:4
FBgn0034743:5 RpS16:5
FBgn0034743:6 RpS16:6
FBgn0034743:7 RpS16:7
FBgn0034743:1 RpS16:1
FBgn0034743:2 RpS16:2

2 Transcripts

DB identifier Gene
FBtr0071855 RpS16
FBtr0343002 RpS16

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0071855-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0343002-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0071855-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0343002-3-prime-utr Drosophila melanogaster

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52 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
37580 NCBI Entrez Gene identifiers FBgn0034743
63196 BioGRID FBgn0034743

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 9978.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 11318.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 9908.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 14438.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 13375.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 16247.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 6001.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 14948.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 15776.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 9238.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 9925.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 10991.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 9194.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 10411.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 15951.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 10749.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 8673.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 9199.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 11692.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 11830.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 11730.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 8130.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 7820.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 7553.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 4516.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 8597.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 9931.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 8056.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 9002.0
FBgn0034743 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 10100.0

6 Introns

DB identifier
Organism . Name
intron_FBgn0034743:1_FBgn0034743:2 Drosophila melanogaster
intron_FBgn0034743:2_FBgn0034743:4 Drosophila melanogaster
intron_FBgn0034743:4_FBgn0034743:5 Drosophila melanogaster
intron_FBgn0034743:5_FBgn0034743:6 Drosophila melanogaster
intron_FBgn0034743:6_FBgn0034743:7 Drosophila melanogaster
intron_FBgn0034743:3_FBgn0034743:4 Drosophila melanogaster

32 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage RpS16 none 3.415611708   19067489
Lipid storage RpS16 none 1.538612115   19067489
Drosophila C virus infection RpS16 Drosophila C virus replication down np   17040126
Cytokinesis regulation RpS16 Binucleate cells weak   15547975
Intracellular Listeria monocytogenes infection RpS16 Increased GFP protein expression moderate   16020693
Drosophila C virus infection RpS16 Drosophila C virus infection reduced np   15713840
Hedgehog signaling RpS16 Decreased Hedgehog reporter activity -2.35   16311596
Constitutive protein secretion and Golgi organization (1) RpS16 Decreased horseradish peroxidase protein expression sp   16452979
Cell size and cell-cycle regulation (1) RpS16 Increased G1 DNA content, decreased G2 DNA content, decreased G1 cell size, decreased viability sp   16496002
Cell size and cell-cycle regulation (2) RpS16 Decreased viability 0.85   16496002
Cell size and cell-cycle regulation (3) RpS16 Decreased cell number 322   16496002
Cell size and cell-cycle regulation (4) RpS16 none below threshold   16496002
Influenza replication RpS16 Decreased Influenza replication -2.44/-3.92   18615016
Lipid storage RpS16 More dispersed droplets strong (but ribosomal)   18408709
Muscle morphogenesis and function (1) RpS16 Lethal np   20220848
Muscle morphogenesis and function (1) RpS16 Lethal np   20220848
Muscle morphogenesis and function (3) RpS16 Split myofibril, fading Z-line np   20220848
Heat nociception (1) RpS16 Developmentally lethal -0.14   21074052
Heat nociception (1) RpS16 none 0.05   21074052
Heart development and function (1) RpS16 Larval lethal 0.06   20371351
Serratia marcescens infection (1) RpS16 none -0.243589743589743   19520911
Notch pathway regulation (4) RpS16 Completely lethal (before pupal) sp   19363474
Notch pathway regulation (4) RpS16 Completely lethal (before pupal) sp   19363474
Hh pathway regulation RpS16 Downregulation of Hh pathway -0.392100513615204   17903264
Adiposity regulation (1) RpS16 none -0.68   20074523
Adiposity regulation (1) RpS16 none 0.22   20074523
RTK-Ras-ERK pathway regulation (1) RpS16 none -0.37 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) RpS16 Decreased ERK phosphorylation after EGF stimulation -2.63 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) RpS16 Increased ERK phosphorylation after sSpitz and EGF stimulation 1.56 10 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) RpS16 Increased ERK phosphorylation after sSpitz and EGF stimulation 3.79 30 minutes sSpitz stimulation 22028469

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