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Gene : Rtc1 D. melanogaster

DB identifier  ? FBgn0020909 Secondary Identifier  ? CG11130
Name  ? Rtc1 Source  FlyBase
  • synonyms:
  • FBgn0020909,
  • CG11130,
  • Rtc1,
  • FBan0011130

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3 Alleles

DB identifier Symbol Allele Class Organism
FBal0220041 Rtc1[G817]   Drosophila melanogaster
FBal0270747 Rtc1[NIG.11130R]   Drosophila melanogaster
FBal0208426 Rtc1[GD7208]   Drosophila melanogaster

34 Clones

Secondary Identifier DB identifier
RP001015440 FBcl0484203
EK026847 FBcl0126158
EK115918 FBcl0127012
EK223749 FBcl0127446
EK111735 FBcl0132240
EK172920 FBcl0132268
EK084316 FBcl0132320
GM08959 FBcl0141425
GM01682 FBcl0141479
GM10315 FBcl0141491
GM03904 FBcl0141694
LD05354 FBcl0157923
RE34311 FBcl0218842
SD02972 FBcl0283776
CK01.24B.D5 FBcl0394763
Dmel_neb_013996_0203_0777 FBcl0366270
Dmel_neb_015246_0324_3372 FBcl0366272
Dmel_neb_015532_0318_2744 FBcl0366273
Dmel_neb_015973_0907_1545 FBcl0366274
CK01.99C.D7 FBcl0409559
CK01.142C.E11 FBcl0409482
CK01.30D.D6 FBcl0409547
RP001034032 FBcl0501140
RP001033150 FBcl0501169
RP001039892 FBcl0501171
RP001021505 FBcl0501172
RP001026891 FBcl0501179
RP001013932 FBcl0501189
RP001005057 FBcl0501190
RP001026467 FBcl0501206

3 Exons

DB identifier Symbol
FBgn0020909:1 Rtc1:1
FBgn0020909:2 Rtc1:2
FBgn0020909:3 Rtc1:3

1 Transcripts

DB identifier Gene
FBtr0073820 Rtc1

2 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0073820-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0073820-3-prime-utr Drosophila melanogaster

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0 Pathways

1 Cross References

Identifier
Source . Name

Subject . Primary Identifier
32338 NCBI Entrez Gene identifiers FBgn0020909

9 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 409.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 580.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 274.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 513.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 329.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 467.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 197.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 555.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 314.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 303.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 440.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 152.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1472.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 213.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 313.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 428.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 230.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 429.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 690.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 509.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 484.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 456.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 299.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 373.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 657.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 848.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 713.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 551.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 627.0
FBgn0020909 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 599.0

2 Introns

DB identifier
Organism . Name
intron_FBgn0020909:1_FBgn0020909:2 Drosophila melanogaster
intron_FBgn0020909:2_FBgn0020909:3 Drosophila melanogaster

17 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Rtc1 none -0.037688306   19067489
Lipid storage Rtc1 none -0.096335803   19067489
Lipid storage Rtc1 none 1.738146758   19067489
Lipid storage Rtc1 none 0.399757948   19067489
Cell size and cell-cycle regulation (1) Rtc1 none sp   16496002
Mutant human huntingtin aggregation Rtc1 Decreased mutant human huntingtin aggregation <= -2   19789644
Muscle morphogenesis and function (1) Rtc1 Weak flyer np   20220848
Heat nociception (1) Rtc1 none -1.17   21074052
Heart development and function (1) Rtc1 none 1   20371351
Serratia marcescens infection (1) Rtc1 Decreased viability after Serratia marcescens infection -4.1358024691358   19520911
Notch pathway regulation (4) Rtc1 Bristle morphology defects, notum malformation death sp   19363474
RTK-Ras-ERK pathway regulation (1) Rtc1 Increased ERK phosphorylation after EGF stimulation 2.13 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) Rtc1 none 0.7 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) Rtc1 none 0.32 30 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) Rtc1 none 0.93 10 minutes sSpitz stimulation 22028469
Hippo pathway regulation Rtc1 none 0.05   23263283
Glycosylation regulation (1) Rtc1 none sp   21203496

0 Submissions