modENCODE |  Help |  blog

Gene : CG4520 D. melanogaster
DB identifier  ? FBgn0038355 Secondary Identifier  ? CG4520
Source  FlyBase
  • synonyms:
  • FBgn0038355,
  • CG4520,
  • FBan0004520
Paste the following link
Lists
This Gene isn't in any lists. Upload a list.

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

1 Alleles

DB identifier Symbol Allele Class Organism
FBal0204294 CG4520[GD11335]   Drosophila melanogaster

7 Clones

Secondary Identifier DB identifier
bs71c06 FBcl0055057
LP06295 FBcl0188829
bs53e07 FBcl0317352
IP11529 FBcl0320086
IP11429 FBcl0320087
IP11329 FBcl0320088
IP11229 FBcl0740130

6 Exons

DB identifier Symbol
FBgn0038355:1 CG4520:1
FBgn0038355:2 CG4520:2
FBgn0038355:3 CG4520:3
FBgn0038355:4 CG4520:4
FBgn0038355:5 CG4520:5
FBgn0038355:6 CG4520:6

2 Transcripts

DB identifier Gene
FBtr0083167 CG4520
FBtr0344379 CG4520

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0083167-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0344379-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0083167-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0344379-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

0 Pathways

2 Cross References

Identifier
Source . Name
Subject . Primary Identifier
41902 NCBI Entrez Gene identifiers FBgn0038355
66963 BioGRID FBgn0038355

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier
Submission . Title
Cell Line . Name
Developmental Stage . Name 		Score
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 17.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 12.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 0.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 0.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 12.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 108.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 23.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 9.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 115.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 37.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 46.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 89.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 73.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 43.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 44.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 27.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 9.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 76.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 46.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 0.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 10.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 55.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 25.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 36.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 6.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 90.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 49.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 47.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 0.0
FBgn0038355 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 19.0

5 Introns

DB identifier
Organism . Name
intron_FBgn0038355:1_FBgn0038355:2 Drosophila melanogaster
intron_FBgn0038355:2_FBgn0038355:3 Drosophila melanogaster
intron_FBgn0038355:3_FBgn0038355:4 Drosophila melanogaster
intron_FBgn0038355:3_FBgn0038355:5 Drosophila melanogaster
intron_FBgn0038355:5_FBgn0038355:6 Drosophila melanogaster

13 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage CG4520 none -0.256354227   19067489
Lipid storage CG4520 none -0.64743156   19067489
Muscle morphogenesis and function (1) CG4520 none np   20220848
Muscle morphogenesis and function (1) CG4520 none np   20220848
Heat nociception (1) CG4520 none -1.17   21074052
Serratia marcescens infection (1) CG4520 none 0.232142857142857   19520911
Serratia marcescens infection (1) CG4520 none 0.961538461538461   19520911
Notch pathway regulation (4) CG4520 none 0   19363474
Notch pathway regulation (4) CG4520 none 0   19363474
Adiposity regulation (1) CG4520 none 0.147   20074523
Wnt proteins secretion CG4520 none 1.1   22094269
Hippo pathway regulation CG4520 none -0.71   23263283
Glycosylation regulation (4) CG4520 none sp   21203496

0 Submissions





© 2002 - 2013 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom