modENCODE |  Help |  blog

Protein : FBpp0083905 D. melanogaster

Primary Accession  ? Q7KS38 Organism . Name  Drosophila melanogaster
MD5 Checksum  39db712581ebd02bcb15a2edd527988f UniProt Accession  Q7KS38
UniProt Name  RS19B_DROME GenBank Identifier  AAN13960
Is UniProt Canonical  true Is Fragment  false
Length  155 Molecular Weight  17362
Name  40S ribosomal protein S19b Secondary Identifier  FBpp0083905

Publication Counts Displayer

Uni Prot Comments Displayer

Protein Sequence Displayer

Genomics

1 Genes

DB identifier Secondary Identifier Symbol Name Source Organism
FBgn0039129 CG5338 RpS19b Ribosomal protein S19b FlyBase D. melanogaster

Proteins

Protein --> Gene + chromosomal location and length of the gene.

Interactions

Cytoscape Network Displayer

 

Other

0 Components

3 Cross References

Identifier
Source . Name

Subject . Primary Identifier
NP_651195.1 RefSeq FBpp0083905
NP_001262891.1 RefSeq FBpp0083905
Dm.20517 UniGene FBpp0083905

3 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Reactome data set  

0 Ec Numbers

2 Locations


Located On . Primary Identifier
Start End Strand
3R 19758583 19759117 -1
3R 19758583 19759117 -1

52 Pathways

Identifier Name
109292 Metabolism of mRNA
92152 Metabolism of RNA
104743 mRNA Processing
92836 RNA Polymerase II Transcription Elongation
30624 RNA Pol II CTD phosphorylation and interaction with CE
112408 Formation of RNA Pol II elongation complex
97522 Formation of the Early Elongation Complex
91707 RNA Polymerase II Pre-transcription Events
87395 RNA Polymerase II Transcription
109232 RNA Polymerase II Transcription Initiation And Promoter Clearance
79444 RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
81662 RNA Polymerase II Promoter Escape
104036 RNA Polymerase II Transcription Initiation
134716 Transport of Mature mRNAs Derived from Intronless Transcripts
98338 Transport of Mature mRNA derived from an Intron-Containing Transcript
30429 Transport of Mature Transcript to Cytoplasm
85081 mRNA Capping
113171 Cleavage of Growing Transcript in the Termination Region
110551 RNA Polymerase II Transcription Termination
98175 Processing of Capped Intron-Containing Pre-mRNA
127672 Transport of the SLBP independent Mature mRNA
144030 Transport of the SLBP Dependant Mature mRNA
139281 Transport of Mature mRNA Derived from an Intronless Transcript
131272 Nonsense Mediated Decay Independent of the Exon Junction Complex
147596 Nonsense Mediated Decay Enhanced by the Exon Junction Complex
125905 Nonsense-Mediated Decay
114009 SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs
144238 SLBP independent Processing of Histone Pre-mRNAs
90038 Processing of Intronless Pre-mRNAs
105649 Gene Expression

3 Protein Domains

DB identifier Name Short Name Type
IPR011991 Winged helix-turn-helix DNA-binding domain WHTH_DNA-bd_dom Domain
IPR001266 Ribosomal protein S19e Ribosomal_S19e Family
IPR018277 Ribosomal protein S19e, conserved site Ribosomal_S19e_CS Conserved_site

2 Transcripts

DB identifier Gene
FBtr0084519 RpS19b
FBtr0332444 RpS19b