modENCODE |  Help |  blog

Gene : sei D. melanogaster

DB identifier  ? FBgn0003353 Secondary Identifier  ? CG3182
Name  ? seizure Source  FlyBase
  • synonyms:
  • CG3182,
  • Seizure/HERG,
  • FBgn0003353,
  • sei,
  • FBan0003182,
  • seizure potassium channel,
  • erg,
  • eag related gene,
  • Derg

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

18 Alleles

DB identifier Symbol Allele Class Organism
FBal0258362 sei[ts2.Scer\UAS]   Drosophila melanogaster
FBal0245738 sei[JF01474]   Drosophila melanogaster
FBal0245739 sei[JF01475]   Drosophila melanogaster
FBal0060890 sei[hs.PW]   Drosophila melanogaster
FBal0060895 sei[G64]   Drosophila melanogaster
FBal0015409 sei[1]   Drosophila melanogaster
FBal0060893 sei[G87]   Drosophila melanogaster
FBal0060896 sei[G50]   Drosophila melanogaster
FBal0015410 sei[2]   Drosophila melanogaster
FBal0060891 sei[RK4]   Drosophila melanogaster
FBal0060892 sei[RK3]   Drosophila melanogaster
FBal0060894 sei[G85]   Drosophila melanogaster
FBal0060897 sei[G43]   Drosophila melanogaster
FBal0210556 sei[GD2196]   Drosophila melanogaster
FBal0216619 sei[HP21840]   Drosophila melanogaster
FBal0246074 sei[Scer\UAS.cFa]   Drosophila melanogaster
FBal0246075 sei[Scer\UAS.T:Avic\GFP]   Drosophila melanogaster
FBal0233745 sei[KK105733]   Drosophila melanogaster

11 Clones

Secondary Identifier DB identifier
EK248816 FBcl0005900
EK067720 FBcl0005940
EK220663 FBcl0005952
GH12235 FBcl0129401
RE50501 FBcl0229038
RE12292 FBcl0229206
RE53547 FBcl0229209
CK01.85C.E7 FBcl0476236
146203 FBcl0476238
97879 FBcl0476215
165999 FBcl0476226

18 Exons

DB identifier Symbol
FBgn0003353:3 sei:3
FBgn0003353:5 sei:5
FBgn0003353:6 sei:6
FBgn0003353:7 sei:7
FBgn0003353:8 sei:8
FBgn0003353:9 sei:9
FBgn0003353:10 sei:10
FBgn0003353:11 sei:11
FBgn0003353:12 sei:12
FBgn0003353:13 sei:13
FBgn0003353:14 sei:14
FBgn0003353:15 sei:15
FBgn0003353:16 sei:16
FBgn0003353:17 sei:17
FBgn0003353:18 sei:18
FBgn0003353:4 sei:4
FBgn0003353:2 sei:2
FBgn0003353:1 sei:1

3 Transcripts

DB identifier Gene
FBtr0072169 sei
FBtr0072170 sei
FBtr0343342 sei

6 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0072169-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0072170-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0343342-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0072169-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0072170-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0343342-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

1 Cross References

Identifier
Source . Name

Subject . Primary Identifier
37843 NCBI Entrez Gene identifiers FBgn0003353

9 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 264.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 157.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 210.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 292.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 385.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 307.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 223.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 302.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 344.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 465.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 265.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 341.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 417.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 520.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 543.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 361.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 554.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 393.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 181.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 200.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 246.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 184.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 513.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 240.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 209.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 677.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 511.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 1046.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 704.0
FBgn0003353 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 850.0

17 Introns

DB identifier
Organism . Name
intron_FBgn0003353:3_FBgn0003353:5 Drosophila melanogaster
intron_FBgn0003353:5_FBgn0003353:6 Drosophila melanogaster
intron_FBgn0003353:6_FBgn0003353:7 Drosophila melanogaster
intron_FBgn0003353:7_FBgn0003353:8 Drosophila melanogaster
intron_FBgn0003353:8_FBgn0003353:9 Drosophila melanogaster
intron_FBgn0003353:9_FBgn0003353:10 Drosophila melanogaster
intron_FBgn0003353:10_FBgn0003353:11 Drosophila melanogaster
intron_FBgn0003353:11_FBgn0003353:12 Drosophila melanogaster
intron_FBgn0003353:12_FBgn0003353:13 Drosophila melanogaster
intron_FBgn0003353:13_FBgn0003353:14 Drosophila melanogaster
intron_FBgn0003353:14_FBgn0003353:15 Drosophila melanogaster
intron_FBgn0003353:15_FBgn0003353:16 Drosophila melanogaster
intron_FBgn0003353:16_FBgn0003353:17 Drosophila melanogaster
intron_FBgn0003353:17_FBgn0003353:18 Drosophila melanogaster
intron_FBgn0003353:4_FBgn0003353:5 Drosophila melanogaster
intron_FBgn0003353:1_FBgn0003353:2 Drosophila melanogaster
intron_FBgn0003353:2_FBgn0003353:5 Drosophila melanogaster

13 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage sei none 0   19067489
Lipid storage sei none -2.172295184   19067489
Cell size and cell-cycle regulation (1) sei none sp   16496002
Store-operated calcium influx regulation sei none np   15866891
Muscle morphogenesis and function (1) sei Flightless np   20220848
Muscle morphogenesis and function (2) sei Wing posture / locomotion / ability to fly defect or lethal / semi-lethal np   20220848
Muscle morphogenesis and function (4) sei Fuzzy (broadened) Z-line np   20220848
Heat nociception (1) sei none -0.32   21074052
Heart development and function (1) sei none 1   20371351
Serratia marcescens infection (1) sei none 0.56338028169014   19520911
Notch pathway regulation (4) sei none 0   19363474
Adiposity regulation (1) sei none -0.512   20074523
Hippo pathway regulation sei none 0.47   23263283

0 Submissions