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Gene : deltaCOP D. melanogaster

DB identifier  ? FBgn0028969 Secondary Identifier  ? CG14813
Name  ? delta-coatomer protein Source  FlyBase
  • synonyms:
  • delta-Cop,
  • delta-coatomer protein,
  • l(1)G0450,
  • Archain,
  • ESTS:63B12S,
  • anon-WO03040301.246,
  • DM63B12S,
  • FBgn0028969,
  • coatomer complex COPI delta-COP subunit,
  • l(1)G0301,
  • Delta COP,
  • DeltaCop,
  • FBgn0015013,
  • l(1)G0051,
  • EG:63B12.10,
  • ARCN1,
  • FBgn0026700,
  • 63B12S,
  • FBgn0029593,
  • FBan0014813,
  • FBgn0066816,
  • FBgn0040159,
  • CG14813,
  • FBgn0027227,
  • COPI delta subunit,
  • Arch,
  • FBgn0020026

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12 Alleles

DB identifier Symbol Allele Class Organism
FBal0245373 deltaCOP[HM04076]   Drosophila melanogaster
FBal0259758 deltaCOP[KK108986]   Drosophila melanogaster
FBal0096846 deltaCOP[G0051]   Drosophila melanogaster
FBal0098120 deltaCOP[G0301]   Drosophila melanogaster
FBal0103730 deltaCOP[G0450]   Drosophila melanogaster
FBal0286590 deltaCOP[Scer\UAS.ORF]   Drosophila melanogaster
FBal0286591 deltaCOP[Scer\UAS.ORF.T:Ivir\HA1]   Drosophila melanogaster
FBal0136154 deltaCOP[dsRNA.cRa]   Drosophila melanogaster
FBal0148517 deltaCOP[dsRNA.cLa]   Drosophila melanogaster
FBal0198566 deltaCOP[GD8451]   Drosophila melanogaster
FBal0217305 deltaCOP[KG07426]   Drosophila melanogaster
FBal0272005 deltaCOP[NIG.14813R]   Drosophila melanogaster

113 Clones

Secondary Identifier DB identifier
CK00375 FBcl0058841
EK057206 FBcl0069610
EK128041 FBcl0069676
EK154556 FBcl0069700
EK292812 FBcl0069734
EK159345 FBcl0069788
EK069701 FBcl0069844
EK211543 FBcl0069862
EN04253 FBcl0090255
EN15446 FBcl0090277
EN12728 FBcl0090285
EN17136 FBcl0090351
EN07932 FBcl0090539
EN07947 FBcl0090585
EN01312 FBcl0090625
GH18123 FBcl0125457
GH23130 FBcl0125829
GH03359 FBcl0125923
GH28074 FBcl0128177
GH07016 FBcl0128181
GH20327 FBcl0128193
GH18302 FBcl0128199
GH02050 FBcl0128203
GH02150 FBcl0128219
GH24418 FBcl0128239
GM19163 FBcl0143874
GM16475 FBcl0143932
HL03889 FBcl0150103
LD03294 FBcl0160004
LD38170 FBcl0173929

9 Exons

DB identifier Symbol
FBgn0028969:9 deltaCOP:9
FBgn0028969:8 deltaCOP:8
FBgn0028969:7 deltaCOP:7
FBgn0028969:6 deltaCOP:6
FBgn0028969:5 deltaCOP:5
FBgn0028969:3 deltaCOP:3
FBgn0028969:2 deltaCOP:2
FBgn0028969:1 deltaCOP:1
FBgn0028969:4 deltaCOP:4

2 Transcripts

DB identifier Gene
FBtr0301926 deltaCOP
FBtr0070371 deltaCOP

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0070371-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0301926-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0070371-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0301926-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
45250 NCBI Entrez Gene identifiers FBgn0028969
69540 BioGRID FBgn0028969

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 3800.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 4060.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 2230.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 3915.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 2895.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 1832.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 3938.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 4506.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 2053.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 3050.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 3350.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 2295.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 3284.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 3035.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 2364.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 2009.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 2698.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 2162.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 3077.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 2170.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 4189.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 2790.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 2145.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 2626.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 2599.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 3461.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 2078.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 1832.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 1585.0
FBgn0028969 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 2332.0

9 Introns

DB identifier
Organism . Name
intron_FBgn0028969:9_FBgn0028969:8 Drosophila melanogaster
intron_FBgn0028969:8_FBgn0028969:7 Drosophila melanogaster
intron_FBgn0028969:7_FBgn0028969:6 Drosophila melanogaster
intron_FBgn0028969:6_FBgn0028969:4 Drosophila melanogaster
intron_FBgn0028969:4_FBgn0028969:3 Drosophila melanogaster
intron_FBgn0028969:3_FBgn0028969:2 Drosophila melanogaster
intron_FBgn0028969:2_FBgn0028969:1 Drosophila melanogaster
intron_FBgn0028969:6_FBgn0028969:5 Drosophila melanogaster
intron_FBgn0028969:5_FBgn0028969:3 Drosophila melanogaster

44 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage deltaCOP Increased lipid droplet area 2.491251009   19067489
Lipid storage deltaCOP Increased lipid droplet area 10.6571694   19067489
ERK signaling deltaCOP ERK activation increased strong   17086199
E. coli / S. aureus infection deltaCOP Decreased phagocytosis np   11912489
Hedgehog signaling deltaCOP Increased Hedgehog reporter activity np   12663920
Cytokinesis regulation deltaCOP Binucleate cells with decreased viability medium   15547975
Intracellular Listeria monocytogenes infection deltaCOP Decreased GFP protein expression strong   16020693
Hedgehog signaling deltaCOP Decreased Hedgehog reporter activity -2.54   16311596
Mycobacterial infection (1) - M. fortuitum infection deltaCOP Decreased M. fortuitum intracellular infection 3 measurement after 3 days 16020694
Mycobacterial infection (2) - E. coli phagocytosis deltaCOP Decreased E. coli phagocytosis np   16020694
Constitutive protein secretion and Golgi organization (1) deltaCOP Decreased horseradish peroxidase protein expression sp   16452979
Constitutive protein secretion and Golgi organization (2) deltaCOP Fused Golgi membranes with endoplasmic reticulum np   16452979
Cell size and cell-cycle regulation (1) deltaCOP none sp   16496002
Candida albicans phagocytosis (1) deltaCOP Decreased Candida albicans phagocytosis np   16336044
Candida albicans phagocytosis (2) deltaCOP Decreased Escherichia coli phagocytosis 20   16336044
Candida albicans phagocytosis (3) deltaCOP Decreased latex beads phagocytosis 41   16336044
Brucella melitensis infection deltaCOP Decreased viability np   18654626
Influenza replication deltaCOP Decreased Influenza replication -2.65/-3.83   18615016
Lipid storage deltaCOP Normal/larger sized lipid droplets, more dispersed strong   18408709
Microtubule assembly and organization deltaCOP none np   18463163
Mutant human huntingtin aggregation deltaCOP Decreased mutant human huntingtin aggregation <= -2   19789644
Muscle morphogenesis and function (1) deltaCOP none np   20220848
Muscle morphogenesis and function (1) deltaCOP Lethal np   20220848
Heat nociception (1) deltaCOP none 0.83   21074052
Heat nociception (1) deltaCOP Developmentally lethal 0   21074052
Heart development and function (1) deltaCOP Larval lethal 0.28   20371351
Serratia marcescens infection (1) deltaCOP none 0.385714285714285   19520911
Serratia marcescens infection (1) deltaCOP none 1.33870967741935   19520911
Notch pathway regulation (4) deltaCOP Completely lethal (before pupal) sp   19363474
Notch pathway regulation (4) deltaCOP none 0   19363474

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