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Gene : beta'Cop D. melanogaster
DB identifier  ? FBgn0025724 Secondary Identifier  ? CG6699
Name  ? beta'-coatomer protein Source  FlyBase
  • synonyms:
  • FBan0006699,
  • FBgn0025724,
  • COPIbeta',
  • COPI beta' subunit,
  • beta'COP,
  • beta'-coatomer protein,
  • CG6699,
  • dbeta'COP,
  • beta'-COP
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7 Alleles

DB identifier Symbol Allele Class Organism
FBal0245319 beta'Cop[HM04017]   Drosophila melanogaster
FBal0286759 beta'Cop[Scer\UAS.ORF]   Drosophila melanogaster
FBal0286760 beta'Cop[Scer\UAS.ORF.T:Ivir\HA1]   Drosophila melanogaster
FBal0263229 beta'Cop[HMS01038]   Drosophila melanogaster
FBal0198552 beta'Cop[GD12007]   Drosophila melanogaster
FBal0223061 beta'Cop[d08097]   Drosophila melanogaster
FBal0275253 beta'Cop[NIG.6699R]   Drosophila melanogaster

181 Clones

Secondary Identifier DB identifier
AT08886 FBcl0043193
EK236715 FBcl0082870
EK053113 FBcl0082898
EK140814 FBcl0082912
EK250424 FBcl0082914
EK142726 FBcl0082918
EK216430 FBcl0082938
EK241033 FBcl0082946
EK211506 FBcl0082952
EN11549 FBcl0101765
EN13857 FBcl0101767
EN15923 FBcl0101771
GH18655 FBcl0111657
GH03437 FBcl0111661
GH20460 FBcl0111663
GH16479 FBcl0111671
GH13639 FBcl0111673
GH13628 FBcl0111675
GH18283 FBcl0111693
GM06665 FBcl0143603
GM05539 FBcl0143607
GM05541 FBcl0143608
GM15284 FBcl0148341
GM12294 FBcl0148342
GM15353 FBcl0148343
GM29743 FBcl0148346
HL05882 FBcl0149203
HL04051 FBcl0149204
HL01012 FBcl0149205
LD12209 FBcl0154123

4 Exons

DB identifier Symbol
FBgn0025724:1 beta'Cop:1
FBgn0025724:2 beta'Cop:2
FBgn0025724:3 beta'Cop:3
FBgn0025724:4 beta'Cop:4

1 Transcripts

DB identifier Gene
FBtr0080469 beta'Cop

2 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0080469-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0080469-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

7 Pathways

2 Cross References

Identifier
Source . Name
Subject . Primary Identifier
45757 NCBI Entrez Gene identifiers FBgn0025724
69859 BioGRID FBgn0025724

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from UniProt  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier
Submission . Title
Cell Line . Name
Developmental Stage . Name 		Score
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 2168.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 2649.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 1607.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 2749.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 2032.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 1079.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1397.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 1546.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 1038.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 2797.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 1940.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 1610.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 2098.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 1707.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 1539.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 1106.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 2116.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 1857.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 2509.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 1601.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1874.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 2389.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 1630.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 1887.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 1900.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 1270.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 878.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 1093.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 1084.0
FBgn0025724 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 928.0

3 Introns

DB identifier
Organism . Name
intron_FBgn0025724:1_FBgn0025724:2 Drosophila melanogaster
intron_FBgn0025724:2_FBgn0025724:3 Drosophila melanogaster
intron_FBgn0025724:3_FBgn0025724:4 Drosophila melanogaster

28 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage beta'Cop Increased lipid droplet area 5.399813549   19067489
Lipid storage beta'Cop Increased lipid droplet area 4.815126037   19067489
ERK signaling beta'Cop ERK activation increased strong   17086199
Drosophila C virus infection beta'Cop Drosophila C virus replication down np   17040126
E. coli / S. aureus infection beta'Cop Decreased phagocytosis np   11912489
Cytokinesis regulation beta'Cop Binucleate cells with decreased viability medium   15547975
Intracellular Listeria monocytogenes infection beta'Cop Decreased GFP protein expression strong   16020693
Hedgehog signaling beta'Cop Decreased Hedgehog reporter activity -2.34   16311596
Constitutive protein secretion and Golgi organization (1) beta'Cop Decreased horseradish peroxidase protein expression sp   16452979
Constitutive protein secretion and Golgi organization (2) beta'Cop Fused Golgi membranes with endoplasmic reticulum np   16452979
Cell size and cell-cycle regulation (1) beta'Cop Decreased G1 DNA content sp   16496002
Lipid storage beta'Cop Normal/larger sized lipid droplets, more dispersed strong   18408709
Muscle morphogenesis and function (1) beta'Cop none np   20220848
Heat nociception (1) beta'Cop none 0.94   21074052
Heart development and function (1) beta'Cop none 1   20371351
Serratia marcescens infection (1) beta'Cop none -0.328125   19520911
Notch pathway regulation (4) beta'Cop none 0   19363474
Hh pathway regulation beta'Cop Downregulation of Hh pathway -0.366362354444961   17903264
Hh pathway regulation beta'Cop Downregulation of Hh pathway -0.277033868055237   17903264
Adiposity regulation (1) beta'Cop none -0.075   20074523
S2 cell spreading beta'Cop none np   21041442
RTK-Ras-ERK pathway regulation (1) beta'Cop Increased ERK phosphorylation after EGF stimulation 5.49 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) beta'Cop Decreased ERK phosphorylation after EGF stimulation -3.14 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) beta'Cop none -0.72 30 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) beta'Cop none -0.29 10 minutes sSpitz stimulation 22028469
Wnt proteins secretion beta'Cop none 1.7   22094269
Hippo pathway regulation beta'Cop none 1.51   23263283
Glycosylation regulation (1) beta'Cop Lethal np   21203496

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