modENCODE |  Help |  blog

Gene : CG5521 D. melanogaster

DB identifier  ? FBgn0039466 Secondary Identifier  ? CG5521
Source  FlyBase
  • synonyms:
  • EP3527,
  • CG5521,
  • FBgn0039466,
  • FBgn0044456,
  • FBan0005521

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

7 Alleles

DB identifier Symbol Allele Class Organism
FBal0276682 CG5521[MI06530]   Drosophila melanogaster
FBal0259180 CG5521[KK102495]   Drosophila melanogaster
FBal0123247 CG5521[EP3527]   Drosophila melanogaster
FBal0148204 CG5521[KG08651]   Drosophila melanogaster
FBal0204711 CG5521[GD11682]   Drosophila melanogaster
FBal0222806 CG5521[d01582]   Drosophila melanogaster
FBal0274716 CG5521[NIG.5521R]   Drosophila melanogaster

23 Clones

Secondary Identifier DB identifier
EK306937 FBcl0020058
EK085938 FBcl0020298
EK009433 FBcl0020718
EK251453 FBcl0021378
EK302805 FBcl0021444
EK269058 FBcl0021892
EP19925 FBcl0086409
EP18302 FBcl0086411
IP14290 FBcl0303684
EC055201 FBcl0300404
EC053352 FBcl0300405
IP14090 FBcl0319353
IP14390 FBcl0323539
IP14190 FBcl0323540
CK01.101D.B12 FBcl0415689
CK01.32A.F2 FBcl0415697
CK01.6B.A2 FBcl0415743
121322 FBcl0415726
177573 FBcl0412493
164559 FBcl0415681
214385.12 FBcl0415571
214243.16 FBcl0415623
281517 FBcl0415717

8 Exons

DB identifier Symbol
FBgn0039466:1 CG5521:1
FBgn0039466:2 CG5521:2
FBgn0039466:4 CG5521:4
FBgn0039466:5 CG5521:5
FBgn0039466:6 CG5521:6
FBgn0039466:7 CG5521:7
FBgn0039466:8 CG5521:8
FBgn0039466:3 CG5521:3

2 Transcripts

DB identifier Gene
FBtr0085069 CG5521
FBtr0301134 CG5521

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0085069-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0301134-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085069-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0301134-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

1 Cross References

Identifier
Source . Name

Subject . Primary Identifier
43242 NCBI Entrez Gene identifiers FBgn0039466

10 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 514.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 508.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 239.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 290.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 315.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 214.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 424.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 603.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 571.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 540.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 615.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 320.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 194.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 706.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 563.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 349.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 399.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 486.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 307.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 426.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 458.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 1022.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 274.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 517.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 493.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 1171.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 366.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 479.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 443.0
FBgn0039466 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 365.0

8 Introns

DB identifier
Organism . Name
intron_FBgn0039466:1_FBgn0039466:2 Drosophila melanogaster
intron_FBgn0039466:2_FBgn0039466:3 Drosophila melanogaster
intron_FBgn0039466:3_FBgn0039466:4 Drosophila melanogaster
intron_FBgn0039466:4_FBgn0039466:5 Drosophila melanogaster
intron_FBgn0039466:5_FBgn0039466:6 Drosophila melanogaster
intron_FBgn0039466:6_FBgn0039466:7 Drosophila melanogaster
intron_FBgn0039466:7_FBgn0039466:8 Drosophila melanogaster
intron_FBgn0039466:2_FBgn0039466:4 Drosophila melanogaster

18 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage CG5521 none 0.699032534   19067489
Lipid storage CG5521 none -0.330141973   19067489
Muscle morphogenesis and function (1) CG5521 none np   20220848
Muscle morphogenesis and function (1) CG5521 none np   20220848
Heat nociception (1) CG5521 none -1.17   21074052
Heart development and function (1) CG5521 none 1   20371351
Serratia marcescens infection (1) CG5521 none -0.471698113207547   19520911
Notch pathway regulation (4) CG5521 none 0   19363474
Notch pathway regulation (4) CG5521 none 0   19363474
Adiposity regulation (1) CG5521 none 0.057   20074523
Secretory pathway regulation CG5521 Decreased BiP signal peptide and firefly luciferase fusion protein expression < -2   19942856
RTK-Ras-ERK pathway regulation (1) CG5521 none 0.93 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) CG5521 Decreased ERK phosphorylation after EGF stimulation -2.49 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) CG5521 none -0.44 10 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) CG5521 none 0.46 30 minutes sSpitz stimulation 22028469
Wnt proteins secretion CG5521 none 0   22094269
Hippo pathway regulation CG5521 none -0.41   23263283
Glycosylation regulation (1) CG5521 none sp   21203496

0 Submissions