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Gene : Rga D. melanogaster

DB identifier  ? FBgn0017550 Secondary Identifier  ? CG2161
Name  ? Regena Source  FlyBase
  • synonyms:
  • l(3)03834,
  • regena,
  • FBan0002161,
  • FBgn0010819,
  • FBgn0017550,
  • CG2138,
  • NOT2,
  • CG2161,
  • RGA

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15 Alleles

DB identifier Symbol Allele Class Organism
FBal0181968 Rga[DG07805]   Drosophila melanogaster
FBal0211946 Rga[CB02139]   Drosophila melanogaster
FBal0181966 Rga[c05583]   Drosophila melanogaster
FBal0181964 Rga[d05798]   Drosophila melanogaster
FBal0181965 Rga[d04523]   Drosophila melanogaster
FBal0181967 Rga[c05122]   Drosophila melanogaster
FBal0159919 Rga[EY10731]   Drosophila melanogaster
FBal0009489 Rga[03834]   Drosophila melanogaster
FBal0130795 Rga[EP3606]   Drosophila melanogaster
FBal0130794 Rga[EP3713]   Drosophila melanogaster
FBal0159918 Rga[dsRNA.cTa]   Drosophila melanogaster
FBal0086775 Rga[03834-rev]   Drosophila melanogaster
FBal0262852 Rga[GL00386]   Drosophila melanogaster
FBal0208269 Rga[GD9741]   Drosophila melanogaster
FBal0222256 Rga[NP3022]   Drosophila melanogaster

70 Clones

Secondary Identifier DB identifier
DPiM_FI01108 FBcl0742118
FI01108 FBcl0383756
EK044460 FBcl0039432
EK177647 FBcl0039456
EK279310 FBcl0039536
EK107549 FBcl0039562
EK166819 FBcl0039616
EK165307 FBcl0039648
EK262205 FBcl0039674
EK301705 FBcl0039768
EK057811 FBcl0039898
EC29085 FBcl0062209
GM01335 FBcl0138217
GM14102 FBcl0144277
LD20206 FBcl0154232
LD18325 FBcl0154254
LD18154 FBcl0154343
LD06984 FBcl0154357
LD11242 FBcl0154358
LD05527 FBcl0154362
LD12846 FBcl0155137
LD19865 FBcl0155143
LD34135 FBcl0167674
LD31526 FBcl0167683
LD35362 FBcl0167690
LD34007 FBcl0167695
LD24850 FBcl0167987
LD24852 FBcl0168551
LD22519 FBcl0168582
RE50572 FBcl0205596

9 Exons

DB identifier Symbol
FBgn0017550:9 Rga:9
FBgn0017550:8 Rga:8
FBgn0017550:7 Rga:7
FBgn0017550:5 Rga:5
FBgn0017550:4 Rga:4
FBgn0017550:3 Rga:3
FBgn0017550:2 Rga:2
FBgn0017550:1 Rga:1
FBgn0017550:6 Rga:6

2 Transcripts

DB identifier Gene
FBtr0078741 Rga
FBtr0078742 Rga

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0078741-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0078742-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0078741-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0078742-3-prime-utr Drosophila melanogaster

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0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
40683 NCBI Entrez Gene identifiers FBgn0017550
65889 BioGRID FBgn0017550

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from UniProt  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 1062.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 862.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 792.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 858.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 849.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 454.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1504.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 1007.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 746.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 1024.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 1064.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 473.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 951.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 659.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 1328.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 686.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1286.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 752.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 920.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 899.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1094.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 837.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 1022.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 906.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 793.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 2506.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 2131.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 1630.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 1579.0
FBgn0017550 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 1298.0

9 Introns

DB identifier
Organism . Name
intron_FBgn0017550:9_FBgn0017550:8 Drosophila melanogaster
intron_FBgn0017550:8_FBgn0017550:7 Drosophila melanogaster
intron_FBgn0017550:7_FBgn0017550:5 Drosophila melanogaster
intron_FBgn0017550:5_FBgn0017550:4 Drosophila melanogaster
intron_FBgn0017550:4_FBgn0017550:3 Drosophila melanogaster
intron_FBgn0017550:3_FBgn0017550:2 Drosophila melanogaster
intron_FBgn0017550:2_FBgn0017550:1 Drosophila melanogaster
intron_FBgn0017550:7_FBgn0017550:6 Drosophila melanogaster
intron_FBgn0017550:6_FBgn0017550:4 Drosophila melanogaster

25 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Rga none 1.518586012   19067489
Lipid storage Rga none 0.286127448   19067489
Chlamydia caviae infection Rga Decreased Chlamydia caviae infection np   17967059
Hedgehog signaling Rga Decreased Hedgehog reporter activity -3.04   16311596
Cell size and cell-cycle regulation (1) Rga none sp   16496002
Mitochondrial biogenesis and function Rga Decreased mitochondrial citrate synthase activity 0.496   18042644
Microtubule assembly and organization Rga none np   18463163
Muscle morphogenesis and function (1) Rga Lethal np   20220848
Heat nociception (1) Rga Increased noxious heat avoidance 3.74   21074052
Heart development and function (1) Rga none 1   20371351
Serratia marcescens infection (1) Rga none -0.209876543209876   19520911
Notch pathway regulation (4) Rga Gain of bristles, loss of bristles, lateral inhibition sp   19363474
Notch pathway regulation (5) Rga Furrows np   19363474
Notch pathway regulation (6) Rga none np   19363474
G2-M DNA damage checkpoint regulation (2) Rga Increased histone H3 phosphorylation with doxorubicin 22.69 with doxorubicin 21205937
G2-M DNA damage checkpoint regulation (2) Rga Increased histone H3 phosphorylation with etoposide 41.46 with etoposide 21205937
G2-M DNA damage checkpoint regulation (2) Rga Increased histone H3 phosphorylation after X-ray exposure 53.29 X-ray exposure 21205937
G2-M DNA damage checkpoint regulation (2) Rga Increased histone H3 phosphorylation with bleocin 15.17 with bleocin 21205937
Hh pathway regulation Rga none -0.102480313430244   17903264
Hh pathway regulation Rga none -0.02829602265721   17903264
Notch pathway regulation (1) Rga Downregulation of Notch pathway np   20493818
Notch pathway regulation (2) Rga Downregulation of Notch pathway; adult wing posterior compartment: crumbled; wing disc NRE:EGFP: down sp en-GAL4 20493818
Notch pathway regulation (3) Rga none np   20493818
Adiposity regulation (1) Rga none -0.291   20074523
Hippo pathway regulation Rga none -0.48   23263283

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