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Gene : Rcc1 D. melanogaster

DB identifier  ? FBgn0002638 Secondary Identifier  ? CG10480
Name  ? Regulator of chromosome condensation 1 ortholog (H. sapiens) Source  FlyBase
  • synonyms:
  • CG18640 (Bj1), RCC protein,
  • Bj1 protein,
  • inxs,
  • CG10480,
  • sdt,
  • FBgn0002638,
  • FBgn0041146,
  • side-out,
  • CG18640 (Bj1),
  • in excess,
  • RCC1,
  • dRCC1,
  • RanGEF,
  • BJ1,
  • FBan0010480

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21 Alleles

DB identifier Symbol Allele Class Organism
FBal0157266 Rcc1[OreR]   Drosophila melanogaster
FBal0258783 Rcc1[KK100628]   Drosophila melanogaster
FBal0157267 Rcc1[FF32] loss of function allele Drosophila melanogaster
FBal0138574 Rcc1[fl.T:Zzzz\His6]   Drosophila melanogaster
FBal0157263 Rcc1[VV179] loss of function allele Drosophila melanogaster
FBal0270484 Rcc1[NIG.10480R]   Drosophila melanogaster
FBal0157261 Rcc1[del.Scer\UAS.T:Hsap\MYC]   Drosophila melanogaster
FBal0157260 Rcc1[unspecified]   Drosophila melanogaster
FBal0138575 Rcc1[betaTub85D.PK]   Drosophila melanogaster
FBal0157268 Rcc1[837]   Drosophila melanogaster
FBal0162768 Rcc1[EY06262]   Drosophila melanogaster
FBal0123321 Rcc1[EP3630]   Drosophila melanogaster
FBal0198834 Rcc1[GD6989]   Drosophila melanogaster
FBal0215818 Rcc1[Scer\UAS.T:Avic\GFP-EGFP]   Drosophila melanogaster
FBal0157265 Rcc1[Scer\UAS.cSa]   Drosophila melanogaster
FBal0157262 Rcc1[XX138] loss of function allele Drosophila melanogaster
FBal0287892 Rcc1[Scer\UAS.P\T.T:Disc\RFP-mCherry]   Drosophila melanogaster
FBal0157264 Rcc1[UU92] loss of function allele Drosophila melanogaster
FBal0262950 Rcc1[GL00485]   Drosophila melanogaster
FBal0223648 Rcc1[NP4610]   Drosophila melanogaster
FBal0223649 Rcc1[CB-5068-3]   Drosophila melanogaster

209 Clones

Secondary Identifier DB identifier
AT31909 FBcl0023603
AT17658 FBcl0023745
AT13194 FBcl0023751
bs45d03 FBcl0051789
bs43f06 FBcl0052155
EK057464 FBcl0059314
EK200163 FBcl0060998
EK052638 FBcl0062550
EK177407 FBcl0062568
EK205257 FBcl0062586
EK258038 FBcl0062620
EK092756 FBcl0063202
EN09339 FBcl0095961
GM03966 FBcl0141523
GM24141 FBcl0146079
GM19036 FBcl0146104
GM14377 FBcl0146125
LD01191 FBcl0152637
LD06413 FBcl0152642
LD03203 FBcl0152643
LD19845 FBcl0152646
LD18603 FBcl0152648
LD03652 FBcl0152649
LD13014 FBcl0152651
LD07391 FBcl0152652
LD04064 FBcl0152656
LD17352 FBcl0152658
LD13587 FBcl0152661
LD19701 FBcl0152664
LD18493 FBcl0152674

5 Exons

DB identifier Symbol
FBgn0002638:4 Bj1:4
FBgn0002638:2 Bj1:2
FBgn0002638:1 Bj1:1
FBgn0002638:5 Bj1:5
FBgn0002638:3 Bj1:3

3 Transcripts

DB identifier Gene
FBtr0077074 Rcc1
FBtr0077076 Rcc1
FBtr0077075 Rcc1

6 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0077074-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0077075-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0077076-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0077074-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0077075-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0077076-3-prime-utr Drosophila melanogaster

Interactions

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Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
38669 NCBI Entrez Gene identifiers FBgn0002638
64129 BioGRID FBgn0002638

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from UniProt  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 1261.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 1573.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 1113.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 898.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 1455.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 2327.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1122.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 2032.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 1314.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 1083.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 1254.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 836.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 941.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 1620.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 1455.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 1280.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1093.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 1325.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 1255.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 1179.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1758.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 1356.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 940.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 878.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 742.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 6632.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 5789.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 4577.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 2984.0
FBgn0002638 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 2856.0

5 Introns

DB identifier
Organism . Name
intron_FBgn0002638:5_FBgn0002638:2 Drosophila melanogaster
intron_FBgn0002638:2_FBgn0002638:1 Drosophila melanogaster
intron_FBgn0002638:5_FBgn0002638:3 Drosophila melanogaster
intron_FBgn0002638:3_FBgn0002638:2 Drosophila melanogaster
intron_FBgn0002638:4_FBgn0002638:2 Drosophila melanogaster

14 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Rcc1 none -0.026252673   19067489
Lipid storage Rcc1 none -2.001751326   19067489
Multipolar division Rcc1 Centrosome clustering defects weak   18662975
Cell size and cell-cycle regulation (1) Rcc1 none sp   16496002
Muscle morphogenesis and function (1) Rcc1 Lethal np   20220848
Muscle morphogenesis and function (1) Rcc1 Lethal np   20220848
Heat nociception (1) Rcc1 none 0.55   21074052
Heart development and function (1) Rcc1 none 1   20371351
Serratia marcescens infection (1) Rcc1 none -0.283185840707964   19520911
Notch pathway regulation (4) Rcc1 Notum malformation death 9   19363474
Self-renewal and differentiation in neural stem cells Rcc1 GFP aggregates number, GFP aggregates size, neuroblast cell shape, ganglion mother cell shorter lineages, ganglion mother cell shape, neuroblast underproliferation, lethal sp   21549331
Adiposity regulation (1) Rcc1 none -0.113   20074523
Hippo pathway regulation Rcc1 none 1.17   23263283
Glycosylation regulation (1) Rcc1 none sp   21203496

0 Submissions