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Gene : Cnot4 D. melanogaster

DB identifier  ? FBgn0051716 Secondary Identifier  ? CG31716
Name  ? Cnot 4 homologue Source  FlyBase
  • synonyms:
  • CG5251,
  • FBgn0032239,
  • CG5244,
  • FBgn0032238,
  • FBgn0051716,
  • CG31716,
  • Cont4,
  • NOT4,
  • FBan0031716,
  • Q8IPB9_DROME

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12 Alleles

DB identifier Symbol Allele Class Organism
FBal0282445 Cnot4[Scer\UAS.cGa]   Drosophila melanogaster
FBal0282446 Cnot4[Scer\UAS.T:Hsap\MYC]   Drosophila melanogaster
FBal0281355 Cnot4[HMJ02078]   Drosophila melanogaster
FBal0239701 Cnot4[JF03203]   Drosophila melanogaster
FBal0186272 Cnot4[e00505]   Drosophila melanogaster
FBal0259073 Cnot4[KK101997]   Drosophila melanogaster
FBal0186273 Cnot4[c06024]   Drosophila melanogaster
FBal0186271 Cnot4[f03208]   Drosophila melanogaster
FBal0186274 Cnot4[LA00636]   Drosophila melanogaster
FBal0202989 Cnot4[GD4410]   Drosophila melanogaster
FBal0222491 Cnot4[c01521]   Drosophila melanogaster
FBal0273531 Cnot4[NIG.31716R]   Drosophila melanogaster

120 Clones

Secondary Identifier DB identifier
154190 FBcl0398224
AT10111 FBcl0033963
bs71h06 FBcl0055009
bs72a12 FBcl0055089
EC26325 FBcl0066355
EC37325 FBcl0066361
EP15338 FBcl0085851
EK200851 FBcl0098772
EK297764 FBcl0098786
EK253521 FBcl0098812
EK227259 FBcl0099502
EK291852 FBcl0099546
EK261728 FBcl0099572
EK130932 FBcl0099576
EK160919 FBcl0099582
EK156919 FBcl0099586
EK167724 FBcl0099592
EK187747 FBcl0099614
EK190664 FBcl0099618
EK258433 FBcl0099624
EK166454 FBcl0099638
EK093134 FBcl0099658
EK004709 FBcl0099664
EK102017 FBcl0099690
EK228341 FBcl0099854
EK243342 FBcl0099858
EK070532 FBcl0099882
EK237850 FBcl0099906
EK163414 FBcl0099912
EK068441 FBcl0100084

27 Exons

DB identifier Symbol
FBgn0051716:1 Cnot4:1
FBgn0051716:4 Cnot4:4
FBgn0051716:8 Cnot4:8
FBgn0051716:9 Cnot4:9
FBgn0051716:10 Cnot4:10
FBgn0051716:11 Cnot4:11
FBgn0051716:13 Cnot4:13
FBgn0051716:15 Cnot4:15
FBgn0051716:17 Cnot4:17
FBgn0051716:18 Cnot4:18
FBgn0051716:19 Cnot4:19
FBgn0051716:20 Cnot4:20
FBgn0051716:21 Cnot4:21
FBgn0051716:22 Cnot4:22
FBgn0051716:23 Cnot4:23
FBgn0051716:24 Cnot4:24
FBgn0051716:25 Cnot4:25
FBgn0051716:26 Cnot4:26
FBgn0051716:2 Cnot4:2
FBgn0051716:5 Cnot4:5
FBgn0051716:7 Cnot4:7
FBgn0051716:14 Cnot4:14
FBgn0051716:3 Cnot4:3
FBgn0051716:16 Cnot4:16
FBgn0051716:27 Cnot4:27
FBgn0051716:6 Cnot4:6
FBgn0051716:12 Cnot4:12

11 Transcripts

DB identifier Gene
FBtr0080011 Cnot4
FBtr0080010 Cnot4
FBtr0304113 Cnot4
FBtr0080012 Cnot4
FBtr0331639 Cnot4
FBtr0331637 Cnot4
FBtr0331638 Cnot4
FBtr0304112 Cnot4
FBtr0080009 Cnot4
FBtr0080013 Cnot4
FBtr0080014 Cnot4

22 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0080010-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0080011-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0080012-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0080013-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0080014-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0080009-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0304112-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0304113-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0331637-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0331638-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0331639-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0080010-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0080011-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0080012-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0080013-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0080014-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0080009-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0304112-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0304113-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0331637-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0331638-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0331639-3-prime-utr Drosophila melanogaster

Interactions

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Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
34416 NCBI Entrez Gene identifiers FBgn0051716
60499 BioGRID FBgn0051716

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 1862.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 2203.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 1456.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 2002.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 1857.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 1949.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1846.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 1954.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 1238.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 2726.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 1810.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 1228.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1917.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 1778.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 1880.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 1447.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1832.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 1996.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 1714.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 2031.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1440.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 2051.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 1765.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 2307.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 2036.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 4906.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 4138.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 3793.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 2737.0
FBgn0051716 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 2462.0

30 Introns

DB identifier
Organism . Name
intron_FBgn0051716:7_FBgn0051716:9 Drosophila melanogaster
intron_FBgn0051716:9_FBgn0051716:10 Drosophila melanogaster
intron_FBgn0051716:10_FBgn0051716:11 Drosophila melanogaster
intron_FBgn0051716:11_FBgn0051716:13 Drosophila melanogaster
intron_FBgn0051716:13_FBgn0051716:14 Drosophila melanogaster
intron_FBgn0051716:14_FBgn0051716:17 Drosophila melanogaster
intron_FBgn0051716:17_FBgn0051716:18 Drosophila melanogaster
intron_FBgn0051716:18_FBgn0051716:19 Drosophila melanogaster
intron_FBgn0051716:19_FBgn0051716:20 Drosophila melanogaster
intron_FBgn0051716:20_FBgn0051716:21 Drosophila melanogaster
intron_FBgn0051716:21_FBgn0051716:22 Drosophila melanogaster
intron_FBgn0051716:22_FBgn0051716:23 Drosophila melanogaster
intron_FBgn0051716:23_FBgn0051716:24 Drosophila melanogaster
intron_FBgn0051716:24_FBgn0051716:25 Drosophila melanogaster
intron_FBgn0051716:25_FBgn0051716:26 Drosophila melanogaster
intron_FBgn0051716:1_FBgn0051716:4 Drosophila melanogaster
intron_FBgn0051716:4_FBgn0051716:8 Drosophila melanogaster
intron_FBgn0051716:8_FBgn0051716:9 Drosophila melanogaster
intron_FBgn0051716:13_FBgn0051716:15 Drosophila melanogaster
intron_FBgn0051716:15_FBgn0051716:17 Drosophila melanogaster
intron_FBgn0051716:1_FBgn0051716:8 Drosophila melanogaster
intron_FBgn0051716:2_FBgn0051716:8 Drosophila melanogaster
intron_FBgn0051716:5_FBgn0051716:8 Drosophila melanogaster
intron_FBgn0051716:3_FBgn0051716:8 Drosophila melanogaster
intron_FBgn0051716:13_FBgn0051716:16 Drosophila melanogaster
intron_FBgn0051716:16_FBgn0051716:17 Drosophila melanogaster
intron_FBgn0051716:25_FBgn0051716:27 Drosophila melanogaster
intron_FBgn0051716:6_FBgn0051716:8 Drosophila melanogaster
intron_FBgn0051716:10_FBgn0051716:12 Drosophila melanogaster
intron_FBgn0051716:12_FBgn0051716:13 Drosophila melanogaster

18 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Cnot4 none 0.850933862   19067489
Lipid storage Cnot4 none 1.315448352   19067489
Lipid storage Cnot4 none 1.611588823   19067489
Lipid storage Cnot4 none -2.060707109   19067489
Alternative splicing Cnot4 none sp   15492211
Cell size and cell-cycle regulation (1) Cnot4 none sp   16496002
Dendrite pattern formation Cnot4 none np   16547170
Heat nociception (1) Cnot4 none 1.29   21074052
Heart development and function (1) Cnot4 none 1   20371351
Heart development and function (2) Cnot4 Decreased viability 3.81   20371351
Serratia marcescens infection (1) Cnot4 none -0.858823529411764   19520911
Notch pathway regulation (4) Cnot4 none 0   19363474
RTK-Ras-ERK pathway regulation (1) Cnot4 none 0.26 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) Cnot4 none 0.15 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) Cnot4 none 1.19 30 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) Cnot4 Increased ERK phosphorylation after sSpitz and EGF stimulation 2.71 10 minutes sSpitz stimulation 22028469
Hippo pathway regulation Cnot4 Downregulation of Hippo pathway 3.74   23263283
Glycosylation regulation (1) Cnot4 none sp   21203496

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