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Gene : pnr D. melanogaster

DB identifier  ? FBgn0003117 Secondary Identifier  ? CG3978
Name  ? pannier Source  FlyBase
  • synonyms:
  • prn,
  • FBgn0038393,
  • GATA,
  • GATA4,
  • CG3978,
  • FBan0003978,
  • dGATAa,
  • FBgn0003117,
  • CG3978-PA,
  • l(3)89B3,
  • GATAa,
  • PANNIER,
  • dGATAa/pannier,
  • GATAa/Pannier,
  • PNR

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67 Alleles

DB identifier Symbol Allele Class Organism
FBal0284150 pnr[Scer\UAS.beta.cFa]   Drosophila melanogaster
FBal0240275 pnr[HM05146]   Drosophila melanogaster
FBal0284317 pnr[D4.Scer\UAS.beta]   Drosophila melanogaster
FBal0284318 pnr[VX1.Scer\UAS.beta]   Drosophila melanogaster
FBal0257258 pnr[HMS00570]   Drosophila melanogaster
FBal0158799 pnr[f04283]   Drosophila melanogaster
FBal0051274 pnr[MD237] neomorphic allele - genetic evidence, loss of function allele, hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0257746 pnr[HMS01082]   Drosophila melanogaster
FBal0257797 pnr[HMS01136]   Drosophila melanogaster
FBal0032464 pnr[VP8]   Drosophila melanogaster
FBal0150296 pnr[EnR.Scer\UAS.T:Rep-en]   Drosophila melanogaster
FBal0268844 pnr[Scer\UAS.beta]   Drosophila melanogaster
FBal0268845 pnr[SA.Scer\UAS.beta]   Drosophila melanogaster
FBal0051269 pnr[VX9] neomorphic allele - genetic evidence Drosophila melanogaster
FBal0154747 pnr[dsRNA.cKa]   Drosophila melanogaster
FBal0051277 pnr[D4R+1] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0032465 pnr[VX1] antimorphic allele - genetic evidence, gain of function allele Drosophila melanogaster
FBal0051272 pnr[VX2] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0051270 pnr[VX7] amorphic allele - genetic evidence Drosophila melanogaster
FBal0117399 pnr[fl.cFa]   Drosophila melanogaster
FBal0051280 pnr[D2R+1] amorphic allele - genetic evidence Drosophila melanogaster
FBal0154746 pnr[dsRNA.si.cKa]   Drosophila melanogaster
FBal0032468 pnr[VX6] amorphic allele - genetic evidence, loss of function allele Drosophila melanogaster
FBal0013908 pnr[1] loss of function allele Drosophila melanogaster
FBal0051282 pnr[D1R+1] amorphic allele - genetic evidence Drosophila melanogaster
FBal0086375 pnr[unspecified]   Drosophila melanogaster
FBal0032462 pnr[D4R+2] amorphic allele - genetic evidence Drosophila melanogaster
FBal0051281 pnr[D1R+2] amorphic allele - genetic evidence Drosophila melanogaster
FBal0051283 pnr[CamR+1]   Drosophila melanogaster
FBal0032461 pnr[D4] antimorphic allele - genetic evidence, gain of function allele Drosophila melanogaster

215 Clones

Secondary Identifier DB identifier
DPiM_RE17974 FBcl0741145
EK193960 FBcl0055524
EK302840 FBcl0055532
EK181854 FBcl0055548
EK199641 FBcl0055570
EK173040 FBcl0055602
EK241428 FBcl0055628
EK251356 FBcl0055634
EK165225 FBcl0055670
EP00444 FBcl0085407
EP07940 FBcl0085685
EP11756 FBcl0085687
EP06740 FBcl0085693
EN05506 FBcl0099035
EN15922 FBcl0099045
EN06606 FBcl0099047
EN12148 FBcl0099051
EN03423 FBcl0099061
EN04116 FBcl0099065
LP03918 FBcl0189196
RE33290 FBcl0229749
RE44750 FBcl0229756
RE17974 FBcl0229777
SD21068 FBcl0287353
SD18716 FBcl0287374
SD19795 FBcl0287381
SD02611 FBcl0287382
SD15838 FBcl0287394
SD03008 FBcl0287402
SD24193 FBcl0287883

10 Exons

DB identifier Symbol
FBgn0003117:9 pnr:9
FBgn0003117:2 pnr:2
FBgn0003117:6 pnr:6
FBgn0003117:7 pnr:7
FBgn0003117:3 pnr:3
FBgn0003117:5 pnr:5
FBgn0003117:10 pnr:10
FBgn0003117:1 pnr:1
FBgn0003117:4 pnr:4
FBgn0003117:8 pnr:8

4 Transcripts

DB identifier Gene
FBtr0083221 pnr
FBtr0083220 pnr
FBtr0335427 pnr
FBtr0335426 pnr

8 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0083220-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0083221-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0335426-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0335427-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0083220-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0083221-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0335426-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0335427-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
44849 NCBI Entrez Gene identifiers FBgn0003117
69326 BioGRID FBgn0003117

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 368.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 1347.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 1785.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 2070.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 2115.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 67.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 191.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 5376.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 2552.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 2929.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 2583.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 1951.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 3124.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 104.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 3109.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 68.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 3354.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 4731.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 39.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 2672.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 2463.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 28.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 45.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 2469.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 1100.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 62.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 458.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 1546.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 1142.0
FBgn0003117 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 961.0

10 Introns

DB identifier
Organism . Name
intron_FBgn0003117:3_FBgn0003117:5 Drosophila melanogaster
intron_FBgn0003117:5_FBgn0003117:7 Drosophila melanogaster
intron_FBgn0003117:7_FBgn0003117:10 Drosophila melanogaster
intron_FBgn0003117:1_FBgn0003117:4 Drosophila melanogaster
intron_FBgn0003117:4_FBgn0003117:6 Drosophila melanogaster
intron_FBgn0003117:6_FBgn0003117:7 Drosophila melanogaster
intron_FBgn0003117:7_FBgn0003117:8 Drosophila melanogaster
intron_FBgn0003117:2_FBgn0003117:6 Drosophila melanogaster
intron_FBgn0003117:7_FBgn0003117:9 Drosophila melanogaster
intron_FBgn0003117:3_FBgn0003117:6 Drosophila melanogaster

14 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage pnr none -0.181954502   19067489
Lipid storage pnr none 5.133873892   19067489
Cell size and cell-cycle regulation (1) pnr none sp   16496002
Cell size and cell-cycle regulation (1) pnr none sp   16496002
Heart development and function pnr Heart patterning defects np   14684833
Dendrite pattern formation pnr none np   16547170
Muscle morphogenesis and function (1) pnr none np   20220848
Heat nociception (1) pnr none -1.17   21074052
Heart development and function (1) pnr none 1   20371351
Serratia marcescens infection (1) pnr none -1.24691358024691   19520911
Notch pathway regulation (4) pnr Notum malformation death 8   19363474
Adiposity regulation (1) pnr none 0.071   20074523
Hippo pathway regulation pnr none 0.18   23263283
Glycosylation regulation (1) pnr none sp   21203496

0 Submissions