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Gene : TpnC47D D. melanogaster

DB identifier  ? FBgn0010423 Secondary Identifier  ? CG9073
Name  ? Troponin C at 47D Source  FlyBase
  • synonyms:
  • TpnC47D,
  • DmTpnCIb,
  • BcDNA:RE34610,
  • CG9073,
  • FBgn0010423,
  • TNC,
  • DmTpnC47D,
  • FBan0009073,
  • TpnC Ib,
  • FBgn0064889,
  • troponin C,
  • TpnCIb,
  • TNC47D,
  • DmTnC2

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3 Alleles

DB identifier Symbol Allele Class Organism
FBal0220558 TpnC47D[JF02067]   Drosophila melanogaster
FBal0208829 TpnC47D[GD4678]   Drosophila melanogaster
FBal0238282 TpnC47D[KK112621]   Drosophila melanogaster

135 Clones

Secondary Identifier DB identifier
DPiM_FI01417 FBcl0741176
EK099414 FBcl0093762
EK222858 FBcl0094140
EK194203 FBcl0094266
EK059450 FBcl0094274
LP07667 FBcl0190906
LP23180 FBcl0190908
RE67109 FBcl0236078
RE59548 FBcl0236079
RE53110 FBcl0236080
RE37971 FBcl0236082
RE20236 FBcl0236084
RE14558 FBcl0236085
RE31507 FBcl0236088
RE35757 FBcl0236090
RE20975 FBcl0236091
RE13765 FBcl0236093
RE47009 FBcl0236095
RE47614 FBcl0236097
RE34610 FBcl0236102
CK01.76A.E4 FBcl0415078
CK01.110A.D11 FBcl0423764
CK01.115A.H5 FBcl0423779
CK01.42D.F10 FBcl0423856
CK01.26C.E9 FBcl0423881
RP003091241 FBcl0626545
RP003677165 FBcl0626540
RP003633546 FBcl0626541
RP003048059 FBcl0626542
RP003356381 FBcl0626543

4 Exons

DB identifier Symbol
FBgn0010423:3 TpnC47D:3
FBgn0010423:2 TpnC47D:2
FBgn0010423:1 TpnC47D:1
FBgn0010423:4 TpnC47D:4

1 Transcripts

DB identifier Gene
FBtr0088184 TpnC47D

2 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0088184-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0088184-3-prime-utr Drosophila melanogaster

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0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
36195 NCBI Entrez Gene identifiers FBgn0010423
61991 BioGRID FBgn0010423

10 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 0.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 0.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 105.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 0.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 34.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 130.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 55.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 126.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 139.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 49.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 0.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 0.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 26.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 31.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 26.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 0.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 50.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 47.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 25.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 0.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 17.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 188.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 0.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 15.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 76.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 25.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 98.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 53.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 46.0
FBgn0010423 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 239.0

3 Introns

DB identifier
Organism . Name
intron_FBgn0010423:4_FBgn0010423:3 Drosophila melanogaster
intron_FBgn0010423:3_FBgn0010423:2 Drosophila melanogaster
intron_FBgn0010423:2_FBgn0010423:1 Drosophila melanogaster

20 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage TpnC47D none -1.401741061   19067489
Lipid storage TpnC47D none -1.183706174   19067489
Muscle morphogenesis and function (1) TpnC47D Lethal np   20220848
Muscle morphogenesis and function (1) TpnC47D none np   20220848
Muscle morphogenesis and function (2) TpnC47D Wing posture / locomotion / ability to fly defect or lethal / semi-lethal np   20220848
Muscle morphogenesis and function (3) TpnC47D Spotty (discontinuous) Z-line np   20220848
Heat nociception (1) TpnC47D none -1.17   21074052
Heart development and function (1) TpnC47D none 1   20371351
Heart development and function (1) TpnC47D none 1   20371351
Serratia marcescens infection (1) TpnC47D none 0.37   19520911
Notch pathway regulation (4) TpnC47D none 0   19363474
Notch pathway regulation (4) TpnC47D none 0   19363474
Adiposity regulation (1) TpnC47D none 0.521   20074523
RTK-Ras-ERK pathway regulation (1) TpnC47D none 0.2 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) TpnC47D none -0.13 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) TpnC47D none 0.31 30 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) TpnC47D Increased ERK phosphorylation after sSpitz and EGF stimulation 1.74 10 minutes sSpitz stimulation 22028469
Hippo pathway regulation TpnC47D none -1.24   23263283
Muscle development and maintenance TpnC47D Pupal lethal sp  
Muscle maintenance TpnC47D none sp  

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