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Gene : usp D. melanogaster

DB identifier  ? FBgn0003964 Secondary Identifier  ? CG4380
Name  ? ultraspiracle Source  FlyBase
  • synonyms:
  • DmUSP,
  • CF1/USP,
  • 2C,
  • l(1)2Cf,
  • CG4380,
  • FBgn0003964,
  • Ultraspiricle,
  • USP,
  • chorion factor CF1,
  • EG:22E5.1,
  • Ultraspiracle,
  • CF1,
  • Chorion factor 1,
  • FBan0004380,
  • l(1)usp,
  • dUSP,
  • X receptor at 2C,
  • XR2C,
  • NR2B4

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31 Alleles

DB identifier Symbol Allele Class Organism
FBal0268259 usp[dsRNA.Scer\UAS]   Drosophila melanogaster
FBal0268260 usp[Scer\UAS.cCa]   Drosophila melanogaster
FBal0239249 usp[JF02546]   Drosophila melanogaster
FBal0281848 usp[574.dsRNA.Scer\UAS]   Drosophila melanogaster
FBal0281849 usp[Scer\UAS.cJa]   Drosophila melanogaster
FBal0284097 usp[miRNA.Scer\UAS]   Drosophila melanogaster
FBal0266527 usp[HMS01620]   Drosophila melanogaster
FBal0268883 usp[T:Avic\GFP-SF,T:Zzzz\FLAG]   Drosophila melanogaster
FBal0046637 usp[hs.PO]   Drosophila melanogaster
FBal0059900 usp[tOa]   Drosophila melanogaster
FBal0062397 usp[GMR.PZ]   Drosophila melanogaster
FBal0017652 usp[3] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0017653 usp[4] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0017650 usp[1]   Drosophila melanogaster
FBal0017651 usp[2] amorphic allele - genetic evidence, loss of function allele Drosophila melanogaster
FBal0117268 usp[Act5C.PW]   Drosophila melanogaster
FBal0120293 usp[unspecified]   Drosophila melanogaster
FBal0121497 usp[dsRNA.cBa]   Drosophila melanogaster
FBal0121498 usp[5]   Drosophila melanogaster
FBal0175398 usp[Delta208]   Drosophila melanogaster
FBal0051008 usp[cDa]   Drosophila melanogaster
FBal0158533 usp[Act5C.PS]   Drosophila melanogaster
FBal0086273 usp[MtnA.PD]   Drosophila melanogaster
FBal0137065 usp[hs.T:Scer\GAL4]   Drosophila melanogaster
FBal0124916 usp[Scer\UAS.cGa]   Drosophila melanogaster
FBal0194188 usp[hs.C.T:Ecol\dam,T:Hsap\MYC]   Drosophila melanogaster
FBal0194189 usp[hs.N.T:Ecol\dam,T:Hsap\MYC]   Drosophila melanogaster
FBal0210846 usp[GD1554]   Drosophila melanogaster
FBal0212727 usp[Delta148]   Drosophila melanogaster
FBal0288380 usp[hsp70.Scer\GAL]   Drosophila melanogaster

69 Clones

Secondary Identifier DB identifier
EK177506 FBcl0070882
EK119159 FBcl0070978
EK283428 FBcl0070990
EK230947 FBcl0071002
EK119007 FBcl0071020
EK071664 FBcl0071042
EK185814 FBcl0071054
GH23982 FBcl0127935
LD13982 FBcl0159931
LD09081 FBcl0159935
LD09973 FBcl0159944
LP08907 FBcl0188497
LP08129 FBcl0188498
LP16860 FBcl0188513
RE18520 FBcl0226913
RE50510 FBcl0226930
RE61503 FBcl0227217
RE26044 FBcl0227220
RE40450 FBcl0227235
RE63310 FBcl0227238
RE62895 FBcl0227241
RE48821 FBcl0227261
RE50721 FBcl0227264
RH62338 FBcl0265931
RH33054 FBcl0265946
RH57624 FBcl0266327
SD16665 FBcl0278185
SD16765 FBcl0278194
SD22323 FBcl0278228
RP003462200 FBcl0488407

4 Exons

DB identifier Symbol
FBgn0003964:2 usp:2
FBgn0003964:4 usp:4
FBgn0003964:3 usp:3
FBgn0003964:1 usp:1

2 Transcripts

DB identifier Gene
FBtr0070346 usp
FBtr0333803 usp

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0070346-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0333803-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0070346-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0333803-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
31165 NCBI Entrez Gene identifiers FBgn0003964
57709 BioGRID FBgn0003964

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 477.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 580.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 463.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 568.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 437.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 250.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 409.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 788.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 502.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 482.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 488.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 466.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 408.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 816.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 478.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 453.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 548.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 254.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 554.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 506.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 989.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 458.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 372.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 531.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 353.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 1469.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 338.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 298.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 314.0
FBgn0003964 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 341.0

2 Introns

DB identifier
Organism . Name
intron_FBgn0003964:4_FBgn0003964:3 Drosophila melanogaster
intron_FBgn0003964:3_FBgn0003964:1 Drosophila melanogaster

13 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage usp none 0.587715097   19067489
Lipid storage usp none -0.637883569   19067489
Cell size and cell-cycle regulation (1) usp none sp   16496002
Dendrite pattern formation usp Decreased arborization np   16547170
Muscle morphogenesis and function (1) usp Flightless np   20220848
Muscle morphogenesis and function (4) usp none np   20220848
Heat nociception (1) usp none -1.17   21074052
Heart development and function (1) usp none 1   20371351
Serratia marcescens infection (1) usp none 0.383561643835616   19520911
Notch pathway regulation (4) usp Completely lethal (pupal) sp   19363474
Adiposity regulation (1) usp none -0.155   20074523
Hippo pathway regulation usp none -1.09   23263283
Glycosylation regulation (1) usp none sp   21203496

0 Submissions