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Gene : Rpn9 D. melanogaster

DB identifier  ? FBgn0028691 Secondary Identifier  ? CG10230
Name  ? Regulatory particle non-ATPase 9 Source  FlyBase
  • synonyms:
  • 0718/06,
  • Nobody,
  • FBan0010230,
  • Rpn9,
  • 718/06,
  • CG10230,
  • PSMD13,
  • p39A,
  • FBgn0028103,
  • S11,
  • l(3)S071806,
  • Rpn4,
  • CT28749,
  • FBgn0028691,
  • Rpn94,
  • l(3)S071806b

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9 Alleles

DB identifier Symbol Allele Class Organism
FBal0268430 Rpn9[NIG.10230R]   Drosophila melanogaster
FBal0155937 Rpn9[EY03352]   Drosophila melanogaster
FBal0257675 Rpn9[HMS01007]   Drosophila melanogaster
FBal0130779 Rpn9[EP3439]   Drosophila melanogaster
FBal0100038 Rpn9[S071806b]   Drosophila melanogaster
FBal0286950 Rpn9[Scer\UAS.ORF]   Drosophila melanogaster
FBal0286951 Rpn9[Scer\UAS.ORF.T:Ivir\HA1]   Drosophila melanogaster
FBal0208413 Rpn9[GD6909]   Drosophila melanogaster
FBal0231689 Rpn9[KK102254]   Drosophila melanogaster

80 Clones

Secondary Identifier DB identifier
IP15827 FBcl0000644
AT05137 FBcl0003457
AT16184 FBcl0003481
AT08302 FBcl0003561
AT04990 FBcl0003585
AT31363 FBcl0003625
AT16444 FBcl0003689
bs19a10 FBcl0047999
EC24461 FBcl0062345
GH04258 FBcl0117177
GH16319 FBcl0118223
GH26135 FBcl0119813
EK131541 FBcl0123068
EK199528 FBcl0123086
EK260917 FBcl0123110
EK227958 FBcl0123120
EK265436 FBcl0123136
EK160816 FBcl0123144
EK199411 FBcl0123150
EK295742 FBcl0123162
EK294952 FBcl0123176
GM04387 FBcl0138305
GM10966 FBcl0138317
LD17530 FBcl0156787
LD12236 FBcl0157047
LD04839 FBcl0157053
LD27692 FBcl0170966
LP17536 FBcl0184591
LP18042 FBcl0185160
LP01856 FBcl0185214

7 Exons

DB identifier Symbol
FBgn0028691:7 Rpn9:7
FBgn0028691:5 Rpn9:5
FBgn0028691:4 Rpn9:4
FBgn0028691:3 Rpn9:3
FBgn0028691:1 Rpn9:1
FBgn0028691:6 Rpn9:6
FBgn0028691:2 Rpn9:2

2 Transcripts

DB identifier Gene
FBtr0084469 Rpn9
FBtr0084470 Rpn9

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0084469-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0084470-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0084469-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0084470-3-prime-utr Drosophila melanogaster

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74 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
42802 NCBI Entrez Gene identifiers FBgn0028691
67740 BioGRID FBgn0028691

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 2418.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 2813.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 1744.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 2286.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 2452.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 2266.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 2636.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 1602.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 1836.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 3876.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 2543.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 1775.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 2618.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 2252.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 2680.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 2605.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1483.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 2194.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 3707.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 1983.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 2518.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 2994.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 2254.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 1995.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 1463.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 5026.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 2144.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 1891.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 1978.0
FBgn0028691 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 1522.0

6 Introns

DB identifier
Organism . Name
intron_FBgn0028691:7_FBgn0028691:5 Drosophila melanogaster
intron_FBgn0028691:5_FBgn0028691:4 Drosophila melanogaster
intron_FBgn0028691:4_FBgn0028691:3 Drosophila melanogaster
intron_FBgn0028691:3_FBgn0028691:1 Drosophila melanogaster
intron_FBgn0028691:6_FBgn0028691:4 Drosophila melanogaster
intron_FBgn0028691:3_FBgn0028691:2 Drosophila melanogaster

24 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Rpn9 none 0.619018744   19067489
Lipid storage Rpn9 none -0.308709077   19067489
ERK signaling Rpn9 ERK activation reduced weak   17086199
Cell size and cell-cycle regulation (1) Rpn9 Increased G1 DNA content sp   16496002
Cell size and cell-cycle regulation (2) Rpn9 none 1.188   16496002
Cell size and cell-cycle regulation (3) Rpn9 none 429   16496002
Mitochondrial biogenesis and function Rpn9 Increased mitochondrial citrate synthase activity, decreased viability 1.987   18042644
Mutant human huntingtin aggregation Rpn9 Decreased mutant human huntingtin aggregation <= -2   19789644
Muscle morphogenesis and function (1) Rpn9 Lethal np   20220848
Heat nociception (1) Rpn9 Developmentally lethal 0.62   21074052
Heart development and function (1) Rpn9 none 1   20371351
Serratia marcescens infection (1) Rpn9 none -0.890410958904109   19520911
Notch pathway regulation (4) Rpn9 Completely lethal (pupal) sp   19363474
Adiposity regulation (1) Rpn9 Decreased triglyceride expression -0.527   20074523
Adiposity regulation (2) Rpn9 Increased triglyceride expression 0.343   20074523
Adiposity regulation (3) Rpn9 none 0.003   20074523
Adiposity regulation (4) Rpn9 none 0.16   20074523
Adiposity regulation (5) Rpn9 Lethal or developmental delay d/l   20074523
RTK-Ras-ERK pathway regulation (1) Rpn9 Decreased ERK phosphorylation after EGF stimulation -2.26 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) Rpn9 none -1.03 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) Rpn9 none 0.74 10 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) Rpn9 Increased ERK phosphorylation after sSpitz and EGF stimulation 1.62 30 minutes sSpitz stimulation 22028469
Hippo pathway regulation Rpn9 none -2.38   23263283
Glycosylation regulation (1) Rpn9 none sp   21203496

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