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Gene : CTCF D. melanogaster

DB identifier  ? FBgn0035769 Secondary Identifier  ? CG8591
Name  ? CTCF Source  FlyBase
  • synonyms:
  • CG8591,
  • CTCF,
  • CCCTC-Binding Factor,
  • dCTCF,
  • FBgn0035769,
  • FBan0008591

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20 Alleles

DB identifier Symbol Allele Class Organism
FBal0240942 CTCF[y+2]   Drosophila melanogaster
FBal0240941 CTCF[y+1]   Drosophila melanogaster
FBal0240943 CTCF[y+6]   Drosophila melanogaster
FBal0184453 CTCF[EY15833] hypomorphic allele - molecular evidence Drosophila melanogaster
FBal0184452 CTCF[f01604]   Drosophila melanogaster
FBal0248563 CTCF[30] hypomorphic allele - molecular evidence Drosophila melanogaster
FBal0241196 CTCF[GE22007]   Drosophila melanogaster
FBal0241197 CTCF[GE24185]   Drosophila melanogaster
FBal0241199 CTCF[P35.2]   Drosophila melanogaster
FBal0241200 CTCF[E5.5]   Drosophila melanogaster
FBal0241198 CTCF[P30.6]   Drosophila melanogaster
FBal0241201 CTCF[R10.3]   Drosophila melanogaster
FBal0241202 CTCF[R15.4]   Drosophila melanogaster
FBal0241204 CTCF[Scer\UAS.T:Avic\GFP-EGFP]   Drosophila melanogaster
FBal0241203 CTCF[+t.5084]   Drosophila melanogaster
FBal0262736 CTCF[GL00266]   Drosophila melanogaster
FBal0206469 CTCF[GD5052]   Drosophila melanogaster
FBal0279129 CTCF[HMS02017]   Drosophila melanogaster
FBal0221168 CTCF[p30.6]   Drosophila melanogaster
FBal0231023 CTCF[KK100986]   Drosophila melanogaster

50 Clones

Secondary Identifier DB identifier
AT14948 FBcl0023113
EP08456 FBcl0081153
EP03907 FBcl0081163
EN06014 FBcl0095637
GH14774 FBcl0111031
EK252815 FBcl0123238
EK177509 FBcl0123298
EK130145 FBcl0123330
EK202321 FBcl0123336
EK065754 FBcl0123380
EK148953 FBcl0123420
EK173947 FBcl0123426
EK177828 FBcl0123460
EK138420 FBcl0123466
EK263826 FBcl0123508
EK129712 FBcl0123514
EK263920 FBcl0123520
EK290342 FBcl0123532
EK308506 FBcl0123538
LP11934 FBcl0182602
LP19677 FBcl0182603
RE64017 FBcl0203853
RE29390 FBcl0203865
RE27905 FBcl0203869
RH48992 FBcl0248842
RH23272 FBcl0248909
RH24627 FBcl0248910
RH71590 FBcl0248924
SD24536 FBcl0283451
214541.1 FBcl0395223

4 Exons

DB identifier Symbol
FBgn0035769:4 CTCF:4
FBgn0035769:3 CTCF:3
FBgn0035769:2 CTCF:2
FBgn0035769:1 CTCF:1

1 Transcripts

DB identifier Gene
FBtr0076878 CTCF

2 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0076878-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0076878-3-prime-utr Drosophila melanogaster

Interactions

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Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
38817 NCBI Entrez Gene identifiers FBgn0035769
64257 BioGRID FBgn0035769

12 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  
Fly Transcription Factor/microRNA Regulatory Network  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 343.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 358.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 542.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 895.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 890.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 188.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 880.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 449.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 135.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 405.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 518.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 481.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 562.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 663.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 866.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 292.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1031.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 1471.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 774.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 809.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1168.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 493.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 476.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 437.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 875.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 2252.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 591.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 794.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 1041.0
FBgn0035769 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 884.0

3 Introns

DB identifier
Organism . Name
intron_FBgn0035769:4_FBgn0035769:3 Drosophila melanogaster
intron_FBgn0035769:3_FBgn0035769:2 Drosophila melanogaster
intron_FBgn0035769:2_FBgn0035769:1 Drosophila melanogaster

15 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage CTCF none -0.665091146   19067489
Lipid storage CTCF none -0.637949807   19067489
Cell size and cell-cycle regulation (1) CTCF none sp   16496002
Dendrite pattern formation CTCF none np   16547170
Muscle morphogenesis and function (1) CTCF Flightless np   20220848
Muscle morphogenesis and function (1) CTCF Lethal np   20220848
Muscle morphogenesis and function (4) CTCF Frayed myofibrils, fuzzy (broadened) Z-line, actin aggregates np   20220848
Heat nociception (1) CTCF Lethal -1.17   21074052
Heart development and function (1) CTCF none 1   20371351
Serratia marcescens infection (1) CTCF none -3.20895522388059   19520911
Notch pathway regulation (4) CTCF Notum malformation death 2   19363474
Notch pathway regulation (4) CTCF Notum malformation death 2   19363474
Adiposity regulation (1) CTCF none -0.087   20074523
Wg pathway regulation (1) CTCF Decreased WgRluc and not changed sFluc protein expression medium   21886182
Hippo pathway regulation CTCF none -1.29   23263283

0 Submissions