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Gene : ct D. melanogaster

DB identifier  ? FBgn0004198 Secondary Identifier  ? CG11387
Name  ? cut Source  FlyBase
  • synonyms:
  • l(1)7Ba,
  • l(1)7Bb,
  • FBgn0004198,
  • FBgn0001303,
  • l(1)VE614,
  • CT,
  • CUT,
  • BcDNA:GH10590,
  • FBgn0029953,
  • FBgn0062500,
  • FBan0011387,
  • kinked-femur,
  • FBgn0000383,
  • kf,
  • CG11387

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326 Alleles

DB identifier Symbol Allele Class Organism
FBal0283549 ct[dsRNA.A.Scer\UAS.T:Avic\GFP]   Drosophila melanogaster
FBal0283550 ct[dsRNA.B.Scer\UAS.T:Avic\GFP]   Drosophila melanogaster
FBal0277648 ct[miRNA.Scer\UAS]   Drosophila melanogaster
FBal0277649 ct[miRNA.Scer\UAS.cWa]   Drosophila melanogaster
FBal0180298 ct[d04137]   Drosophila melanogaster
FBal0002014 ct[L32]   Drosophila melanogaster
FBal0257597 ct[HMS00924]   Drosophila melanogaster
FBal0045479 ct[546-1]   Drosophila melanogaster
FBal0098268 ct[pN34]   Drosophila melanogaster
FBal0002024 ct[L47]   Drosophila melanogaster
FBal0030973 ct[+178]   Drosophila melanogaster
FBal0030974 ct[+D]   Drosophila melanogaster
FBal0030975 ct[13K]   Drosophila melanogaster
FBal0028120 ct[46l]   Drosophila melanogaster
FBal0001934 ct[6]   Drosophila melanogaster
FBal0057674 ct[pN30]   Drosophila melanogaster
FBal0057675 ct[pN1]   Drosophila melanogaster
FBal0001942 ct[78a]   Drosophila melanogaster
FBal0001943 ct[81:1]   Drosophila melanogaster
FBal0034379 ct[83h]   Drosophila melanogaster
FBal0002000 ct[K]   Drosophila melanogaster
FBal0002002 ct[L1]   Drosophila melanogaster
FBal0002005 ct[L10]   Drosophila melanogaster
FBal0002006 ct[L13]   Drosophila melanogaster
FBal0002007 ct[L18]   Drosophila melanogaster
FBal0002008 ct[L20]   Drosophila melanogaster
FBal0002009 ct[L23]   Drosophila melanogaster
FBal0002010 ct[L25]   Drosophila melanogaster
FBal0002011 ct[L27]   Drosophila melanogaster
FBal0002012 ct[L30]   Drosophila melanogaster

40 Clones

Secondary Identifier DB identifier
DPiM_RE08418 FBcl0741573
EK270362 FBcl0062748
EK208612 FBcl0062818
EK214424 FBcl0062894
EK250662 FBcl0062912
EK202259 FBcl0063950
EK121237 FBcl0064184
EK121910 FBcl0064220
EK256644 FBcl0064270
EK080928 FBcl0064350
EK305140 FBcl0064370
EK088728 FBcl0064388
EP11551 FBcl0087007
EN17127 FBcl0100325
EN04652 FBcl0100395
GH10590 FBcl0123845
RE49041 FBcl0221121
RE67108 FBcl0221227
RE08418 FBcl0221287
IP14932 FBcl0317856
IP15032 FBcl0317857
IP15132 FBcl0317858
51466 FBcl0394732
572815 FBcl0416183
524050 FBcl0416236
CK01.146C.H9 FBcl0416262
CK01.7D.E2 FBcl0416313
CK01.106B.G7 FBcl0416341
73245 FBcl0416292
214221.17 FBcl0416274

13 Exons

DB identifier Symbol
FBgn0004198:6 ct:6
FBgn0004198:7 ct:7
FBgn0004198:5 ct:5
FBgn0004198:1 ct:1
FBgn0004198:10 ct:10
FBgn0004198:11 ct:11
FBgn0004198:12 ct:12
FBgn0004198:2 ct:2
FBgn0004198:4 ct:4
FBgn0004198:9 ct:9
FBgn0004198:3 ct:3
FBgn0004198:8 ct:8
FBgn0004198:13 ct:13

4 Transcripts

DB identifier Gene
FBtr0331733 ct
FBtr0114613 ct
FBtr0305134 ct
FBtr0071068 ct

8 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0071068-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0114613-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0305134-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0331733-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0071068-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0114613-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0305134-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0331733-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
44540 NCBI Entrez Gene identifiers FBgn0004198
69119 BioGRID FBgn0004198

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 1050.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 577.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 1402.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 1023.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 1173.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 924.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 3120.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 1120.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 554.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 1348.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 1826.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 1732.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1812.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 2141.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 1608.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 5994.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 2229.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 2677.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 2674.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 868.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1694.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 900.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 1080.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 1229.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 1110.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 277.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 200.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 296.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 569.0
FBgn0004198 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 888.0

15 Introns

DB identifier
Organism . Name
intron_FBgn0004198:1_FBgn0004198:5 Drosophila melanogaster
intron_FBgn0004198:5_FBgn0004198:6 Drosophila melanogaster
intron_FBgn0004198:6_FBgn0004198:8 Drosophila melanogaster
intron_FBgn0004198:8_FBgn0004198:10 Drosophila melanogaster
intron_FBgn0004198:10_FBgn0004198:11 Drosophila melanogaster
intron_FBgn0004198:11_FBgn0004198:13 Drosophila melanogaster
intron_FBgn0004198:6_FBgn0004198:7 Drosophila melanogaster
intron_FBgn0004198:7_FBgn0004198:10 Drosophila melanogaster
intron_FBgn0004198:11_FBgn0004198:12 Drosophila melanogaster
intron_FBgn0004198:1_FBgn0004198:2 Drosophila melanogaster
intron_FBgn0004198:2_FBgn0004198:4 Drosophila melanogaster
intron_FBgn0004198:4_FBgn0004198:5 Drosophila melanogaster
intron_FBgn0004198:7_FBgn0004198:9 Drosophila melanogaster
intron_FBgn0004198:9_FBgn0004198:11 Drosophila melanogaster
intron_FBgn0004198:3_FBgn0004198:4 Drosophila melanogaster

29 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage ct none -0.163516982   19067489
Lipid storage ct none 1.686278836   19067489
Cell size and cell-cycle regulation (1) ct none sp   16496002
Cell size and cell-cycle regulation (1) ct none sp   16496002
Cell size and cell-cycle regulation (1) ct none sp   16496002
Dendrite pattern formation ct none np   16547170
Combinatorial effect with methyl methanesulphonate (1) ct Synthetic lethal with methyl methanesulphonate sp   19543366
Combinatorial effect with methyl methanesulphonate (2) ct Synthetic lethal with methyl methanesulphonate sp   19543366
Muscle morphogenesis and function (1) ct Lethal np   20220848
Muscle morphogenesis and function (1) ct Lethal np   20220848
Heat nociception (1) ct none 1.39   21074052
Heart development and function (1) ct none 1   20371351
Heart development and function (2) ct Decreased viability 3.03   20371351
Serratia marcescens infection (1) ct none -0.744186046511627   19520911
Notch pathway regulation (4) ct Bristle morphology defects 3   19363474
Notch pathway regulation (4) ct Bristle morphology defects, planar polarity defects sp   19363474
Adiposity regulation (1) ct none 0.457   20074523
Blood cell homeostasis regulation (1) ct none np   20540764
Blood cell homeostasis regulation (2) ct none np   20540764
RTK-Ras-ERK pathway regulation (1) ct none 0.19 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) ct Decreased ERK phosphorylation after EGF stimulation -1.77 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) ct Increased ERK phosphorylation after sSpitz and EGF stimulation 2.69 10 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) ct Increased ERK phosphorylation after sSpitz and EGF stimulation 3.65 30 minutes sSpitz stimulation 22028469
Hippo pathway regulation ct none -0.83   23263283
Immune deficiency pathway regulation ct Upregulation of IMD pathway after E.coli stimulation 4.25   21297578
Muscle development and maintenance ct Pupal lethal sp  
Muscle maintenance ct none sp  
Glycosylation regulation (1) ct Increased mannose Chp glycosylation sp   21203496
Glycosylation regulation (2) ct none np   21203496

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