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Gene : gammaCop D. melanogaster

DB identifier  ? FBgn0028968 Secondary Identifier  ? CG1528
Name  ? gamma-coatomer protein Source  FlyBase
  • synonyms:
  • COPIgamma,
  • COPI gamma subunit,
  • 0573/02,
  • copg,
  • anon-WO0118547.334,
  • l(3)S057302,
  • FBgn0062085,
  • l(3)S057302b,
  • CG1528,
  • 573.02,
  • lethal (3) S057302b,
  • gammaCOP,
  • FBgn0041590,
  • gamma-COP,
  • FBgn0028968,
  • FBan0001528

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41 Alleles

DB identifier Symbol Allele Class Organism
FBal0240229 gammaCop[HM05099]   Drosophila melanogaster
FBal0188367 gammaCop[d06498]   Drosophila melanogaster
FBal0137678 gammaCop[KG06383]   Drosophila melanogaster
FBal0244033 gammaCop[Delta128]   Drosophila melanogaster
FBal0244034 gammaCop[Delta114]   Drosophila melanogaster
FBal0244035 gammaCop[Scer\UAS.cJa]   Drosophila melanogaster
FBal0244036 gammaCop[alphaTub84B.PJ]   Drosophila melanogaster
FBal0240985 gammaCop[5]   Drosophila melanogaster
FBal0240986 gammaCop[12]   Drosophila melanogaster
FBal0240987 gammaCop[6]   Drosophila melanogaster
FBal0240988 gammaCop[8]   Drosophila melanogaster
FBal0240989 gammaCop[10]   Drosophila melanogaster
FBal0240990 gammaCop[677]   Drosophila melanogaster
FBal0240991 gammaCop[11-3]   Drosophila melanogaster
FBal0240992 gammaCop[Omega35]   Drosophila melanogaster
FBal0240993 gammaCop[Omega38.T:Disc\RFP-mRFP]   Drosophila melanogaster
FBal0240994 gammaCop[Scer\UAS.P\T.cGa]   Drosophila melanogaster
FBal0286689 gammaCop[Scer\UAS.ORF]   Drosophila melanogaster
FBal0286690 gammaCop[Scer\UAS.ORF.T:Ivir\HA1]   Drosophila melanogaster
FBal0191990 gammaCop[21b]   Drosophila melanogaster
FBal0191889 gammaCop[14a] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0191719 gammaCop[15a] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0137677 gammaCop[S057302]   Drosophila melanogaster
FBal0189810 gammaCop[20b]   Drosophila melanogaster
FBal0190022 gammaCop[6a]   Drosophila melanogaster
FBal0190152 gammaCop[10a]   Drosophila melanogaster
FBal0190291 gammaCop[7a]   Drosophila melanogaster
FBal0190692 gammaCop[11a] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0190754 gammaCop[9a]   Drosophila melanogaster
FBal0191107 gammaCop[8a]   Drosophila melanogaster

55 Clones

Secondary Identifier DB identifier
AT31902 FBcl0039211
AT12696 FBcl0039215
AT30114 FBcl0039219
AT21538 FBcl0039249
AT19087 FBcl0039259
AT12365 FBcl0039263
EK138464 FBcl0070496
EC00882 FBcl0071775
EP08757 FBcl0087239
EP02527 FBcl0087491
EP22018 FBcl0087511
EN12252 FBcl0100725
GH19935 FBcl0120287
EK073330 FBcl0139110
EK139641 FBcl0141002
EK104708 FBcl0141040
EK246718 FBcl0141044
EK172538 FBcl0141052
EK259803 FBcl0141234
EK214545 FBcl0141242
EK162231 FBcl0141254
EK228451 FBcl0141346
EK162931 FBcl0141354
EK101245 FBcl0141590
HL03418 FBcl0149721
LP04458 FBcl0185758
LP01448 FBcl0185871
RE31589 FBcl0216221
RE35931 FBcl0216279
RE45212 FBcl0216378

8 Exons

DB identifier Symbol
FBgn0028968:1 gammaCop:1
FBgn0028968:3 gammaCop:3
FBgn0028968:5 gammaCop:5
FBgn0028968:6 gammaCop:6
FBgn0028968:7 gammaCop:7
FBgn0028968:8 gammaCop:8
FBgn0028968:2 gammaCop:2
FBgn0028968:4 gammaCop:4

4 Transcripts

DB identifier Gene
FBtr0085793 gammaCop
FBtr0301290 gammaCop
FBtr0085794 gammaCop
FBtr0330096 gammaCop

8 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0085793-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0085794-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0301290-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0330096-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085793-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085794-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0301290-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0330096-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
43717 NCBI Entrez Gene identifiers FBgn0028968
68560 BioGRID FBgn0028968

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 2923.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 3067.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 1440.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 2909.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 2901.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 1216.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1475.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 2656.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 1421.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 2216.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 2492.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 2024.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 2053.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 1775.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 1595.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 1695.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1747.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 1798.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 2135.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 2196.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 2284.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 3600.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 1406.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 1892.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 1707.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 2019.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 731.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 1035.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 1152.0
FBgn0028968 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 1510.0

8 Introns

DB identifier
Organism . Name
intron_FBgn0028968:1_FBgn0028968:3 Drosophila melanogaster
intron_FBgn0028968:3_FBgn0028968:5 Drosophila melanogaster
intron_FBgn0028968:5_FBgn0028968:6 Drosophila melanogaster
intron_FBgn0028968:6_FBgn0028968:7 Drosophila melanogaster
intron_FBgn0028968:7_FBgn0028968:8 Drosophila melanogaster
intron_FBgn0028968:1_FBgn0028968:4 Drosophila melanogaster
intron_FBgn0028968:4_FBgn0028968:5 Drosophila melanogaster
intron_FBgn0028968:2_FBgn0028968:5 Drosophila melanogaster

44 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage gammaCop Increased lipid droplet area 6.680129945   19067489
Lipid storage gammaCop Increased lipid droplet area 5.199261308   19067489
Chlamydia caviae infection gammaCop Decreased Chlamydia caviae infection np   17967059
Drosophila C virus infection gammaCop Drosophila C virus replication down np   17040126
Cytokinesis gammaCop Multi-nucleate cells np   15380073
Cytokinesis regulation gammaCop Binucleate cells with decreased viability medium   15547975
Intracellular Listeria monocytogenes infection gammaCop Decreased GFP protein expression moderate   16020693
L. monocytogenes infection gammaCop Fewer infected cells, less vacuolar escape ***   16157870
Hedgehog signaling gammaCop Decreased Hedgehog reporter activity -2.07   16311596
Mycobacterial infection (1) - M. fortuitum infection gammaCop Decreased M. fortuitum intracellular infection 6.2 measurement after 3 days 16020694
Mycobacterial infection (2) - E. coli phagocytosis gammaCop Decreased E. coli phagocytosis np   16020694
Constitutive protein secretion and Golgi organization (1) gammaCop Decreased horseradish peroxidase protein expression sp   16452979
Constitutive protein secretion and Golgi organization (2) gammaCop Fused Golgi membranes with endoplasmic reticulum np   16452979
Cell size and cell-cycle regulation (1) gammaCop Decreased G1 DNA content sp   16496002
Cell size and cell-cycle regulation (2) gammaCop none 1.147   16496002
Cell size and cell-cycle regulation (3) gammaCop Decreased cell number 411   16496002
Cell size and cell-cycle regulation (4) gammaCop none below threshold   16496002
Candida albicans phagocytosis (1) gammaCop Decreased Candida albicans phagocytosis np   16336044
Candida albicans phagocytosis (2) gammaCop Decreased Escherichia coli phagocytosis 26   16336044
Candida albicans phagocytosis (3) gammaCop Decreased latex beads phagocytosis 11   16336044
Brucella melitensis infection gammaCop Decreased viability np   18654626
C. trachomatis infection gammaCop C. trachomatis infection down np   18369471
Influenza replication gammaCop Decreased Influenza replication -1.12/-3.99   18615016
Lipid storage gammaCop Normal/larger sized lipid droplets, more dispersed strong   18408709
Mutant human huntingtin aggregation gammaCop Decreased mutant human huntingtin aggregation <= -2   19789644
Muscle morphogenesis and function (1) gammaCop Lethal np   20220848
Heat nociception (1) gammaCop Developmentally lethal 0   21074052
Heart development and function (1) gammaCop Embryonic lethal or no offspring 0   20371351
Serratia marcescens infection (1) gammaCop none -0.45360824742268   19520911
Notch pathway regulation (4) gammaCop Completely lethal (pupal) sp   19363474

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