modENCODE |  Help |  blog

Protein : FBpp0078205 D. melanogaster

Primary Accession  ? Q9VNP8 Organism . Name  Drosophila melanogaster
MD5 Checksum  f95f85784ab6248a879d0d8094c748d9 UniProt Accession  Q9VNP8
UniProt Name  Q9VNP8_DROME GenBank Identifier  AAF51879
Is UniProt Canonical  true Is Fragment  false
Length  438 Molecular Weight  48620
Name  Suppressor of Stem-Loop mutation ortholog, isoform B Secondary Identifier  FBpp0078205

Publication Counts Displayer

Uni Prot Comments Displayer

Protein Sequence Displayer

Genomics

1 Genes

DB identifier Secondary Identifier Symbol Name Source Organism
FBgn0037202 CG11115 Ssl1 Suppressor of Stem-Loop mutation ortholog (S. cerevisiae) FlyBase D. melanogaster

Proteins

Protein --> Gene + chromosomal location and length of the gene.

Interactions

Cytoscape Network Displayer

 

Other

0 Components

3 Cross References

Identifier
Source . Name

Subject . Primary Identifier
NP_001262227.1 RefSeq FBpp0078205
Dm.6850 UniGene FBpp0078205
NP_649427.1 RefSeq FBpp0078205

3 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Reactome data set  

0 Ec Numbers

2 Locations


Located On . Primary Identifier
Start End Strand
3L 22872466 22873884 1
3L 22872466 22873884 1

26 Pathways

Identifier Name
29721 Transcription-coupled NER (TC-NER)
94657 Dual incision reaction in TC-NER
91383 Dual incision reaction in GG-NER
83576 Formation of incision complex in GG-NER
88746 Global Genomic NER (GG-NER)
106982 Nucleotide Excision Repair
104743 mRNA Processing
92836 RNA Polymerase II Transcription Elongation
30624 RNA Pol II CTD phosphorylation and interaction with CE
112408 Formation of RNA Pol II elongation complex
97522 Formation of the Early Elongation Complex
91707 RNA Polymerase II Pre-transcription Events
87395 RNA Polymerase II Transcription
109232 RNA Polymerase II Transcription Initiation And Promoter Clearance
79444 RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
81662 RNA Polymerase II Promoter Escape
104036 RNA Polymerase II Transcription Initiation
85081 mRNA Capping
105649 Gene Expression
131262 RNA Polymerase I Promoter Escape
131654 RNA Polymerase I Chain Elongation
80486 RNA Polymerase I Promoter Clearance
102763 RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription
110625 RNA Polymerase I Transcription
100899 Transcription
88201 DNA Repair

5 Protein Domains

DB identifier Name Short Name Type
IPR002035 von Willebrand factor, type A VWF_A Domain
IPR007087 Zinc finger, C2H2 Znf_C2H2 Domain
IPR007198 Ssl1-like Ssl1-like Domain
IPR004595 TFIIH C1-like domain TFIIH_C1-like_dom Domain
IPR012170 TFIIH subunit Ssl1/p44 TFIIH_SSL1/p44 Family

2 Transcripts

DB identifier Gene
FBtr0078554 Ssl1
FBtr0332051 Ssl1