modENCODE |  Help |  blog

Gene : polybromo D. melanogaster

DB identifier  ? FBgn0039227 Secondary Identifier  ? CG11375
Name  ? polybromo Source  FlyBase
  • synonyms:
  • BAF180,
  • PB,
  • Bap180,
  • anon-WO0140519.158,
  • FBan0011375,
  • CG11375,
  • FBgn0044721,
  • POLYBROMO,
  • FBgn0039227

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

9 Alleles

DB identifier Symbol Allele Class Organism
FBal0261207 polybromo[33.2]   Drosophila melanogaster
FBal0280340 polybromo[Hsp83.T:Zzzz\FLAG]   Drosophila melanogaster
FBal0257220 polybromo[HMS00531]   Drosophila melanogaster
FBal0162578 polybromo[EY14080]   Drosophila melanogaster
FBal0162577 polybromo[EY14730]   Drosophila melanogaster
FBal0215079 polybromo[GD4310]   Drosophila melanogaster
FBal0221008 polybromo[Delta86]   Drosophila melanogaster
FBal0221009 polybromo[Scer\UAS.cCa]   Drosophila melanogaster
FBal0231490 polybromo[KK101808]   Drosophila melanogaster

54 Clones

Secondary Identifier DB identifier
FI03643 FBcl0481803
EK097417 FBcl0019706
EK183861 FBcl0020892
EK097442 FBcl0021556
UUGC0874 FBcl0004863
EK250757 FBcl0022486
EK133506 FBcl0013112
GH15541 FBcl0102319
GM14901 FBcl0145542
GM22962 FBcl0145543
LD09563 FBcl0151032
LD19045 FBcl0151051
LD20231 FBcl0151213
LD14305 FBcl0151339
LD15701 FBcl0151340
LD20908 FBcl0151681
LD03113 FBcl0151867
LD16264 FBcl0151998
LD26355 FBcl0163112
LD41562 FBcl0163120
LD44344 FBcl0163137
LD25892 FBcl0163150
LD28883 FBcl0163159
LD28826 FBcl0163192
LD42137 FBcl0163280
LD42123 FBcl0163391
LD22134 FBcl0163466
LD22136 FBcl0163941
LD42071 FBcl0163967
LD38130 FBcl0163988

4 Exons

DB identifier Symbol
FBgn0039227:4 polybromo:4
FBgn0039227:3 polybromo:3
FBgn0039227:2 polybromo:2
FBgn0039227:1 polybromo:1

1 Transcripts

DB identifier Gene
FBtr0084740 polybromo

2 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0084740-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0084740-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
42954 NCBI Entrez Gene identifiers FBgn0039227
67879 BioGRID FBgn0039227

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 964.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 725.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 588.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 629.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 914.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 349.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 607.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 677.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 469.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 863.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 453.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 489.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 538.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 526.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 687.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 643.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 659.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 636.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 585.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 656.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 599.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 645.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 869.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 439.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 714.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 2201.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 2306.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 2207.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 1167.0
FBgn0039227 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 759.0

3 Introns

DB identifier
Organism . Name
intron_FBgn0039227:4_FBgn0039227:3 Drosophila melanogaster
intron_FBgn0039227:3_FBgn0039227:2 Drosophila melanogaster
intron_FBgn0039227:2_FBgn0039227:1 Drosophila melanogaster

8 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage polybromo none -0.324330415   19067489
Lipid storage polybromo none 1.87247758   19067489
Cell size and cell-cycle regulation (1) polybromo none sp   16496002
Dendrite pattern formation polybromo none np   16547170
Notch induced transcription polybromo none -0.25234 N(delta)ecn Notch stimulation 20959007
Notch induced transcription polybromo Downregulation of Notch pathway after Notch stimulation -2.3429 N(delta)ecn Notch stimulation 20959007
Notch induced transcription polybromo none -1.5289 without Notch stimulation 20959007
Hippo pathway regulation polybromo none -1.59   23263283

0 Submissions