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Gene : Smr D. melanogaster

DB identifier  ? FBgn0265523 Secondary Identifier  ? CG4013
Name  ? Smrter Source  FlyBase
  • synonyms:
  • FBgn0024308,
  • FBgn0263865,
  • SMR,
  • silencing mediator of retinoid and thyroid hormone receptors-related ecdysone receptor-interacting factor,
  • l(1)G0060,
  • FBgn0030416,
  • FBan0004013,
  • anon-WO0153538.73,
  • SMRT-related ecdysone receptor interacting factor,
  • E52,
  • FBgn0261376,
  • FBgn0029797,
  • lincRNA.983,
  • Smarter,
  • SMRTER,
  • FBgn0265523,
  • SMRT-related ecdysone receptor-interacting factor,
  • FBgn0027321,
  • FBgn0028313,
  • lethal (1) G0060,
  • CG4013,
  • SANT domain protein,
  • FBgn0045877,
  • l(1)G0361,
  • CG12719

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35 Alleles

DB identifier Symbol Allele Class Organism
FBal0220758 Smr[JF02413]   Drosophila melanogaster
FBal0219415 Smr[G0124]   Drosophila melanogaster
FBal0242117 Smr[HM05198]   Drosophila melanogaster
FBal0181512 Smr[EY15527]   Drosophila melanogaster
FBal0239025 Smr[G0060]   Drosophila melanogaster
FBal0281851 Smr[dsRNA.IR3.Scer\UAS]   Drosophila melanogaster
FBal0181503 Smr[f07370]   Drosophila melanogaster
FBal0181504 Smr[f06135]   Drosophila melanogaster
FBal0181507 Smr[f02906]   Drosophila melanogaster
FBal0181508 Smr[e04587]   Drosophila melanogaster
FBal0181502 Smr[f07890]   Drosophila melanogaster
FBal0181505 Smr[f05286]   Drosophila melanogaster
FBal0181506 Smr[f04090]   Drosophila melanogaster
FBal0257522 Smr[HMS00842]   Drosophila melanogaster
FBal0181509 Smr[e04572]   Drosophila melanogaster
FBal0181510 Smr[e04389]   Drosophila melanogaster
FBal0181511 Smr[e04377]   Drosophila melanogaster
FBal0257622 Smr[HMS00952]   Drosophila melanogaster
FBal0259949 Smr[KK114893]   Drosophila melanogaster
FBal0100305 Smr[G0361]   Drosophila melanogaster
FBal0130595 Smr[BG01648]   Drosophila melanogaster
FBal0135793 Smr[dsRNA.cRa]   Drosophila melanogaster
FBal0261855 Smr[CPTI002514]   Drosophila melanogaster
FBal0262143 Smr[CPTI001328]   Drosophila melanogaster
FBal0262144 Smr[CPTI001385]   Drosophila melanogaster
FBal0261463 Smr[CPTI004047]   Drosophila melanogaster
FBal0218797 Smr[MB07914]   Drosophila melanogaster
FBal0229335 Smr[f02932]   Drosophila melanogaster
FBal0229334 Smr[KG06889]   Drosophila melanogaster
FBal0229336 Smr[f07408]   Drosophila melanogaster

60 Clones

Secondary Identifier DB identifier
ESG011d.E21_A05 FBcl0010105
bs71g12 FBcl0052129
CK01235 FBcl0059827
EP10019 FBcl0082115
EN13845 FBcl0096499
GH01420 FBcl0118529
EK132146 FBcl0125652
EK304516 FBcl0125686
EK073848 FBcl0125756
EK290664 FBcl0125804
EK021719 FBcl0125812
EK160602 FBcl0125846
EK046736 FBcl0125858
EK201506 FBcl0125872
EK118606 FBcl0125888
EK294011 FBcl0125940
EK097721 FBcl0125946
EK280129 FBcl0125956
EK119241 FBcl0125960
EK293845 FBcl0125964
EK301826 FBcl0125968
GM04442 FBcl0141541
GM04170 FBcl0141760
LD14688 FBcl0156574
LD10926 FBcl0156582
LD05402 FBcl0156630
LD05522 FBcl0156643
LD09517 FBcl0156647
LD14387 FBcl0156652
RH66660 FBcl0256318

16 Exons

DB identifier Symbol
FBgn0263865:15 Smr:15
FBgn0263865:14 Smr:14
FBgn0263865:16 Smr:16
FBgn0263865:11 Smr:11
FBgn0263865:9 Smr:9
FBgn0263865:8 Smr:8
FBgn0263865:7 Smr:7
FBgn0263865:6 Smr:6
FBgn0263865:5 Smr:5
FBgn0263865:4 Smr:4
FBgn0263865:3 Smr:3
FBgn0263865:2 Smr:2
FBgn0263865:13 Smr:13
FBgn0263865:12 Smr:12
FBgn0263865:1 Smr:1
FBgn0263865:10 Smr:10

4 Transcripts

DB identifier Gene
FBtr0333766 Smr
FBtr0333768 Smr
FBtr0333765 Smr
FBtr0333767 Smr

8 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0333765-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0333766-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0333767-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0333768-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0333765-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0333766-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0333767-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0333768-3-prime-utr Drosophila melanogaster

Interactions

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
32225 NCBI Entrez Gene identifiers FBgn0265523
58618 BioGRID FBgn0265523

10 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  

0 Expression Scores

18 Introns

DB identifier
Organism . Name
intron_FBgn0263865:16_FBgn0263865:11 Drosophila melanogaster
intron_FBgn0263865:11_FBgn0263865:9 Drosophila melanogaster
intron_FBgn0263865:9_FBgn0263865:8 Drosophila melanogaster
intron_FBgn0263865:8_FBgn0263865:7 Drosophila melanogaster
intron_FBgn0263865:7_FBgn0263865:6 Drosophila melanogaster
intron_FBgn0263865:6_FBgn0263865:5 Drosophila melanogaster
intron_FBgn0263865:5_FBgn0263865:4 Drosophila melanogaster
intron_FBgn0263865:4_FBgn0263865:3 Drosophila melanogaster
intron_FBgn0263865:3_FBgn0263865:2 Drosophila melanogaster
intron_FBgn0263865:15_FBgn0263865:14 Drosophila melanogaster
intron_FBgn0263865:14_FBgn0263865:13 Drosophila melanogaster
intron_FBgn0263865:13_FBgn0263865:9 Drosophila melanogaster
intron_FBgn0263865:16_FBgn0263865:12 Drosophila melanogaster
intron_FBgn0263865:12_FBgn0263865:9 Drosophila melanogaster
intron_FBgn0263865:3_FBgn0263865:1 Drosophila melanogaster
intron_FBgn0263865:16_FBgn0263865:14 Drosophila melanogaster
intron_FBgn0263865:13_FBgn0263865:10 Drosophila melanogaster
intron_FBgn0263865:10_FBgn0263865:8 Drosophila melanogaster

70 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Smr Decreased lipid droplet area -2.422487813   19067489
Lipid storage Smr Decreased lipid droplet area -3.561741251   19067489
Lipid storage Smr Decreased lipid droplet area -3.352831742   19067489
Lipid storage Smr Decreased lipid droplet area -0.591024046   19067489
Lipid storage Smr none 0.071595175   19067489
Lipid storage Smr none -0.707134641   19067489
Lipid storage Smr none 1.711022153   19067489
Lipid storage Smr none 0.517201946   19067489
Lipid storage Smr none 0.096192724   19067489
E. coli / S. aureus infection Smr Cell death np   11912489
Cytokinesis regulation Smr Binucleate cells with decreased viability weak   15547975
Wnt signaling Smr Increased Wnt reporter activity 4.4   15817814
Hedgehog signaling Smr Decreased Hedgehog reporter activity -3.01   16311596
Constitutive protein secretion and Golgi organization (1) Smr Decreased horseradish peroxidase protein expression sp   16452979
Constitutive protein secretion and Golgi organization (1) Smr Decreased horseradish peroxidase protein expression sp   16452979
Cell size and cell-cycle regulation (1) Smr none sp   16496002
Cell size and cell-cycle regulation (1) Smr none sp   16496002
Cell size and cell-cycle regulation (1) Smr none sp   16496002
Candida albicans phagocytosis (1) Smr Decreased Candida albicans phagocytosis np   16336044
Candida albicans phagocytosis (2) Smr none 50   16336044
Candida albicans phagocytosis (3) Smr Decreased latex beads phagocytosis 30   16336044
Dendrite pattern formation Smr none np   16547170
Combinatorial effect with methyl methanesulphonate (2) Smr none sp   19543366
Mutant human huntingtin aggregation Smr Decreased mutant human huntingtin aggregation <= -2   19789644
Heat nociception (1) Smr none -1.17   21074052
Heat nociception (1) Smr none -0.14   21074052
Heart development and function (1) Smr none 1   20371351
Heart development and function (1) Smr none 1   20371351
Notch pathway regulation (4) Smr none 0   19363474
Notch pathway regulation (4) Smr Completely lethal (pupal) sp   19363474

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