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Gene : Ser D. melanogaster

DB identifier  ? FBgn0004197 Secondary Identifier  ? CG6127
Name  ? Serrate Source  FlyBase
  • synonyms:
  • Bd,
  • SER,
  • FBgn0004197,
  • FBgn0003355,
  • serrate,
  • Ripped wing,
  • serratoid,
  • std,
  • CT18858,
  • Beaded,
  • mel(3)8,
  • FBgn0003111,
  • dmSerrate,
  • CG6127,
  • FBan0006127,
  • Rpw

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95 Alleles

DB identifier Symbol Allele Class Organism
FBal0265715 Ser[Scer\UAS.cUa]   Drosophila melanogaster
FBal0030220 Ser[D] neomorphic allele - genetic evidence, gain of function allele Drosophila melanogaster
FBal0279614 Ser[MI05334]   Drosophila melanogaster
FBal0257838 Ser[HMS01179]   Drosophila melanogaster
FBal0285270 Ser[Del3.Scer\UAS]   Drosophila melanogaster
FBal0285271 Ser[Del3.Scer\UAS.T:Disc\RFP-tdTomato]   Drosophila melanogaster
FBal0285272 Ser[Del4.Scer\UAS]   Drosophila melanogaster
FBal0285273 Ser[Del5.Scer\UAS]   Drosophila melanogaster
FBal0285274 Ser[Del6.Scer\UAS]   Drosophila melanogaster
FBal0285275 Ser[hydroDelta6.Scer\UAS]   Drosophila melanogaster
FBal0285276 Ser[Del4-6.Scer\UAS.T:Disc\RFP-tdTomato]   Drosophila melanogaster
FBal0285277 Ser[Del7.Scer\UAS]   Drosophila melanogaster
FBal0285278 Ser[sec.Scer\UAS]   Drosophila melanogaster
FBal0285279 Ser[sec.Del6.Scer\UAS]   Drosophila melanogaster
FBal0285280 Ser[Nterm6.Scer\UAS.T:Disc\RFP-tdTomato]   Drosophila melanogaster
FBal0285281 Ser[Nterm6Del4.Scer\UAS]   Drosophila melanogaster
FBal0285282 Ser[NIR.Scer\UAS.T:Disc\RFP-tdTomato]   Drosophila melanogaster
FBal0015427 Ser[1]   Drosophila melanogaster
FBal0015418 Ser[Bd-3] cold sensitive antimorphic allele - genetic evidence Drosophila melanogaster
FBal0034012 Ser[Rpw]   Drosophila melanogaster
FBal0244411 Ser[DN.cHa.Scer\UAS]   Drosophila melanogaster
FBal0249398 Ser[VDRC.cUa]   Drosophila melanogaster
FBal0034015 Ser[Rx112]   Drosophila melanogaster
FBal0015431 Ser[rev5-5]   Drosophila melanogaster
FBal0015429 Ser[rev2-11] loss of function allele, amorphic allele - genetic evidence Drosophila melanogaster
FBal0015422 Ser[Bd-r1]   Drosophila melanogaster
FBal0030221 Ser[RX106] amorphic allele - genetic evidence, loss of function allele Drosophila melanogaster
FBal0058269 Ser[M8-1]   Drosophila melanogaster
FBal0034016 Ser[Rx119] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0015426 Ser[Bd-r5]   Drosophila melanogaster

34 Clones

Secondary Identifier DB identifier
EK049953 FBcl0021184
EK185023 FBcl0021204
EK044856 FBcl0021464
EK031201 FBcl0021544
EP19338 FBcl0086425
EP18555 FBcl0086429
LP24305 FBcl0191424
RE42104 FBcl0237576
RE44666 FBcl0237590
RH43763 FBcl0273503
RH46608 FBcl0273508
SD24485 FBcl0288851
EC053954 FBcl0300419
EC053473 FBcl0300420
EC052912 FBcl0300421
EC052908 FBcl0300422
EC051937 FBcl0300423
EC052386 FBcl0300424
EC054962 FBcl0300425
EC055331 FBcl0300426
CK01.55C.F8 FBcl0417756
CK01.62A.F2 FBcl0417778
RP004180770 FBcl0568527
RP004161774 FBcl0568528
RP004489389 FBcl0568529
RP004166591 FBcl0568530
RP004081572 FBcl0568531
RP004446378 FBcl0568532
166178 FBcl0417601
214507.13 FBcl0417699

16 Exons

DB identifier Symbol
FBgn0004197:15 Ser:15
FBgn0004197:14 Ser:14
FBgn0004197:13 Ser:13
FBgn0004197:12 Ser:12
FBgn0004197:11 Ser:11
FBgn0004197:10 Ser:10
FBgn0004197:9 Ser:9
FBgn0004197:8 Ser:8
FBgn0004197:7 Ser:7
FBgn0004197:6 Ser:6
FBgn0004197:5 Ser:5
FBgn0004197:4 Ser:4
FBgn0004197:3 Ser:3
FBgn0004197:2 Ser:2
FBgn0004197:1 Ser:1
FBgn0004197:16 Ser:16

2 Transcripts

DB identifier Gene
FBtr0085128 Ser
FBtr0344121 Ser

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0085128-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0344121-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085128-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0344121-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
43275 NCBI Entrez Gene identifiers FBgn0004197
68163 BioGRID FBgn0004197

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 167.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 92.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 673.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 488.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 578.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 156.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 748.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 659.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 539.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 254.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 627.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 1073.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 599.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 156.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 115.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 367.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 128.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 100.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 2728.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 160.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 233.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 431.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 233.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 357.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 116.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 81.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 162.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 83.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 256.0
FBgn0004197 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 673.0

15 Introns

DB identifier
Organism . Name
intron_FBgn0004197:16_FBgn0004197:14 Drosophila melanogaster
intron_FBgn0004197:14_FBgn0004197:13 Drosophila melanogaster
intron_FBgn0004197:13_FBgn0004197:12 Drosophila melanogaster
intron_FBgn0004197:12_FBgn0004197:11 Drosophila melanogaster
intron_FBgn0004197:11_FBgn0004197:10 Drosophila melanogaster
intron_FBgn0004197:10_FBgn0004197:9 Drosophila melanogaster
intron_FBgn0004197:9_FBgn0004197:8 Drosophila melanogaster
intron_FBgn0004197:8_FBgn0004197:7 Drosophila melanogaster
intron_FBgn0004197:7_FBgn0004197:6 Drosophila melanogaster
intron_FBgn0004197:6_FBgn0004197:5 Drosophila melanogaster
intron_FBgn0004197:5_FBgn0004197:4 Drosophila melanogaster
intron_FBgn0004197:4_FBgn0004197:3 Drosophila melanogaster
intron_FBgn0004197:3_FBgn0004197:2 Drosophila melanogaster
intron_FBgn0004197:2_FBgn0004197:1 Drosophila melanogaster
intron_FBgn0004197:15_FBgn0004197:14 Drosophila melanogaster

37 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Ser none -0.117191893   19067489
Lipid storage Ser none 0.289431137   19067489
Neural outgrowth Ser Defasciculation np   18604272
Cell size and cell-cycle regulation (1) Ser none sp   16496002
Combinatorial effect with methyl methanesulphonate (2) Ser none sp   19543366
Muscle morphogenesis and function (1) Ser none np   20220848
Muscle morphogenesis and function (1) Ser none np   20220848
Heat nociception (1) Ser Developmentally lethal 0   21074052
Heat nociception (1) Ser none -1.17   21074052
Heat nociception (1) Ser none -1.17   21074052
Heart development and function (1) Ser none 1   20371351
Heart development and function (1) Ser none 0.75   20371351
Heart development and function (2) Ser none 2.67   20371351
Heart development and function (2) Ser Decreased viability 3.63   20371351
Serratia marcescens infection (1) Ser none -0.688524590163934   19520911
Serratia marcescens infection (1) Ser none 0.170454545454545   19520911
Notch pathway regulation (1) Ser none no phenotype temperature: 18 19363474
Notch pathway regulation (1) Ser none no phenotype temperature: 25 19363474
Notch pathway regulation (1) Ser Lethal lethal temperature: 29 19363474
Notch pathway regulation (2) Ser Adults die in food, escapers have no phenotype lethal temperature: 25 19363474
Notch pathway regulation (2) Ser Adults die in food, pupal lethal lethal temperature: 29 19363474
Notch pathway regulation (2) Ser none no phenotype temperature: 18 19363474
Notch pathway regulation (3) Ser none no phenotype temperature: 18 19363474
Notch pathway regulation (3) Ser none no phenotype temperature: 25 19363474
Notch pathway regulation (3) Ser none no phenotype temperature: 29 19363474
Notch pathway regulation (4) Ser none 0   19363474
Notch pathway regulation (4) Ser Colour defects 3   19363474
Notch pathway regulation (4) Ser Colour defects, bristle morphology defects sp   19363474
Notch pathway regulation (1) Ser Downregulation of Notch pathway np   20493818
Notch pathway regulation (2) Ser Downregulation of Notch pathway; wing disc NRE:EGFP: down sp en-GAL4 20493818

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