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Gene : upd3 D. melanogaster

DB identifier  ? FBgn0053542 Secondary Identifier  ? CG33542
Name  ? unpaired 3 Source  FlyBase
  • synonyms:
  • CG15062/CG5963,
  • Unpaired 3,
  • CG5963,
  • FBgn0053542,
  • Unpaired 3beta,
  • CG33542,
  • CG15062,
  • FBgn0030909,
  • unpaired-3,
  • UPD3,
  • FBgn0069074,
  • FBan0005963,
  • upd homolog,
  • upd-3,
  • Unpaired3,
  • FBgn0030910,
  • FBan0015062,
  • unpaired-like protein 3

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15 Alleles

DB identifier Symbol Allele Class Organism
FBal0283677 upd3[Delta] amorphic allele - molecular evidence Drosophila melanogaster
FBal0283678 upd3[T:Avic\GFP]   Drosophila melanogaster
FBal0263647 upd3[d04951]   Drosophila melanogaster
FBal0177289 upd3[d02012]   Drosophila melanogaster
FBal0257330 upd3[HMS00646]   Drosophila melanogaster
FBal0177290 upd3[d00871]   Drosophila melanogaster
FBal0158535 upd3[d11639]   Drosophila melanogaster
FBal0257028 upd3[Scer\UAS.cMa]   Drosophila melanogaster
FBal0191483 upd3[UE69]   Drosophila melanogaster
FBal0177288 upd3[dsRNA.Scer\UAS]   Drosophila melanogaster
FBal0239393 upd3[HM05061]   Drosophila melanogaster
FBal0210843 upd3[GD6811]   Drosophila melanogaster
FBal0215151 upd3[GD9892]   Drosophila melanogaster
FBal0219659 upd3[Scer\UAS.cWa]   Drosophila melanogaster
FBal0236805 upd3[KK110348]   Drosophila melanogaster

3 Clones

Secondary Identifier DB identifier
IP04620 FBcl0303604
IP08763 FBcl0303948
FI03911 FBcl0474605

4 Exons

DB identifier Symbol
FBgn0053542:1 upd3:1
FBgn0053542:2 upd3:2
FBgn0053542:3 upd3:3
FBgn0053542:4 upd3:4

1 Transcripts

DB identifier Gene
FBtr0113465 upd3

2 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0113465-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0113465-3-prime-utr Drosophila melanogaster

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0 Pathways

1 Cross References

Identifier
Source . Name

Subject . Primary Identifier
3346149 NCBI Entrez Gene identifiers FBgn0053542

8 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 271.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 176.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 134.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 214.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 98.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 292.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 997.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 229.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 123.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 238.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 209.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 156.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 86.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 40.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 147.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 374.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 257.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 192.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 109.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 115.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 102.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 133.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 181.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 283.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 738.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 97.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 102.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 45.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 44.0
FBgn0053542 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 54.0

3 Introns

DB identifier
Organism . Name
intron_FBgn0053542:1_FBgn0053542:2 Drosophila melanogaster
intron_FBgn0053542:2_FBgn0053542:3 Drosophila melanogaster
intron_FBgn0053542:3_FBgn0053542:4 Drosophila melanogaster

15 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage upd3 none -1.378748155   19067489
Lipid storage upd3 none -1.67326984   19067489
Lipid storage upd3 none 2.265531895   19067489
Lipid storage upd3 none 0.571930483   19067489
Lipid storage upd3 none -0.001965554   19067489
Lipid storage upd3 none 0.593053004   19067489
Multipolar division upd3 Centrosome clustering defects medium   18662975
Muscle morphogenesis and function (1) upd3 none np   20220848
Muscle morphogenesis and function (1) upd3 none np   20220848
Heat nociception (1) upd3 none -1.17   21074052
Heat nociception (1) upd3 none -1.17   21074052
Notch pathway regulation (4) upd3 none 0   19363474
Notch pathway regulation (4) upd3 none 0   19363474
Hippo pathway regulation upd3 none -2.43   23263283
Hippo pathway regulation upd3 none -0.16   23263283

0 Submissions