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Gene : Nop60B D. melanogaster

DB identifier  ? FBgn0259937 Secondary Identifier  ? CG3333
Name  ? Nucleolar protein at 60B Source  FlyBase
  • synonyms:
  • FBgn0022178,
  • CG3333,
  • CG333,
  • Uhg6,
  • FBgn0023184,
  • FBgn0259937,
  • dUhg6,
  • Minifly,
  • l(2)k05318,
  • FBan0003333,
  • Nop60,
  • MFL/Nop60B,
  • FBgn0083122,
  • Nop60b,
  • dUhg-like 6,
  • mfl

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22 Alleles

DB identifier Symbol Allele Class Organism
FBal0266255 Nop60B[GL00555]   Drosophila melanogaster
FBal0135893 Nop60B[dsRNA.sp.Scer\UAS]   Drosophila melanogaster
FBal0135895 Nop60B[dsRNA.Sym.Scer\UAS]   Drosophila melanogaster
FBal0182481 Nop60B[f01318]   Drosophila melanogaster
FBal0258920 Nop60B[KK101240]   Drosophila melanogaster
FBal0064498 Nop60B[k06308]   Drosophila melanogaster
FBal0064499 Nop60B[k05318]   Drosophila melanogaster
FBal0144705 Nop60B[mM176] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0144709 Nop60B[DL2011] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0284817 Nop60B[MI07849]   Drosophila melanogaster
FBal0094652 Nop60B[4]   Drosophila melanogaster
FBal0097206 Nop60B[hs.PG]   Drosophila melanogaster
FBal0144708 Nop60B[DL3]   Drosophila melanogaster
FBal0094653 Nop60B[3]   Drosophila melanogaster
FBal0094654 Nop60B[2]   Drosophila melanogaster
FBal0097207 Nop60B[1] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0144710 Nop60B[DL10]   Drosophila melanogaster
FBal0144707 Nop60B[DL4]   Drosophila melanogaster
FBal0094651 Nop60B[5]   Drosophila melanogaster
FBal0144706 Nop60B[DL6]   Drosophila melanogaster
FBal0207774 Nop60B[GD10940]   Drosophila melanogaster
FBal0207775 Nop60B[GD16822]   Drosophila melanogaster

125 Clones

Secondary Identifier DB identifier
EK157415 FBcl0009300
AT23018 FBcl0014403
AT01142 FBcl0014467
EN07617 FBcl0093153
EN07103 FBcl0093159
EN12515 FBcl0093183
EN12004 FBcl0093257
EK252243 FBcl0100850
EK166920 FBcl0100858
EK235140 FBcl0100868
EK170835 FBcl0100886
EK222104 FBcl0100912
EK056533 FBcl0100926
EK236444 FBcl0100934
EK171010 FBcl0100942
EK057428 FBcl0101010
EK307436 FBcl0101022
GM01060 FBcl0139357
GM05796 FBcl0139389
GM04914 FBcl0139391
GM10417 FBcl0139397
GM04478 FBcl0139403
GM06244 FBcl0139425
GM08871 FBcl0139443
GM06075 FBcl0139445
GM24818 FBcl0144948
GM26228 FBcl0144961
GM22118 FBcl0144962
GM25604 FBcl0144963
GM31833 FBcl0144968

15 Exons

DB identifier Symbol
FBgn0259937:1 Nop60B:1
FBgn0259937:2 Nop60B:2
FBgn0259937:3 Nop60B:3
FBgn0259937:4 Nop60B:4
FBgn0259937:5 Nop60B:5
FBgn0259937:6 Nop60B:6
FBgn0259937:7 Nop60B:7
FBgn0259937:8 Nop60B:8
FBgn0259937:10 Nop60B:10
FBgn0259937:11 Nop60B:11
FBgn0259937:12 Nop60B:12
FBgn0259937:13 Nop60B:13
FBgn0259937:14 Nop60B:14
FBgn0259937:15 Nop60B:15
FBgn0259937:9 Nop60B:9

5 Transcripts

DB identifier Gene
FBtr0100213 Nop60B
FBtr0304599 Nop60B
FBtr0300861 Nop60B
FBtr0300227 Nop60B
FBtr0072258 Nop60B

10 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0072258-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0100213-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0300227-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0300861-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0304599-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0072258-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0100213-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0300227-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0300861-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0304599-3-prime-utr Drosophila melanogaster

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0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
37873 NCBI Entrez Gene identifiers FBgn0259937
63449 BioGRID FBgn0259937

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 4816.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 5133.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 2177.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 2624.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 3513.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 4070.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1345.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 4706.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 1685.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 2929.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 2361.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 2094.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1768.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 3156.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 3902.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 3745.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1391.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 3469.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 3867.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 1498.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 2860.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 4142.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 3093.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 2535.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 2421.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 10605.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 3819.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 3644.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 4554.0
FBgn0259937 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 5076.0

16 Introns

DB identifier
Organism . Name
intron_FBgn0259937:1_FBgn0259937:2 Drosophila melanogaster
intron_FBgn0259937:2_FBgn0259937:3 Drosophila melanogaster
intron_FBgn0259937:3_FBgn0259937:4 Drosophila melanogaster
intron_FBgn0259937:4_FBgn0259937:5 Drosophila melanogaster
intron_FBgn0259937:5_FBgn0259937:7 Drosophila melanogaster
intron_FBgn0259937:7_FBgn0259937:8 Drosophila melanogaster
intron_FBgn0259937:8_FBgn0259937:10 Drosophila melanogaster
intron_FBgn0259937:10_FBgn0259937:11 Drosophila melanogaster
intron_FBgn0259937:11_FBgn0259937:12 Drosophila melanogaster
intron_FBgn0259937:12_FBgn0259937:13 Drosophila melanogaster
intron_FBgn0259937:13_FBgn0259937:14 Drosophila melanogaster
intron_FBgn0259937:14_FBgn0259937:15 Drosophila melanogaster
intron_FBgn0259937:13_FBgn0259937:15 Drosophila melanogaster
intron_FBgn0259937:7_FBgn0259937:9 Drosophila melanogaster
intron_FBgn0259937:3_FBgn0259937:12 Drosophila melanogaster
intron_FBgn0259937:5_FBgn0259937:6 Drosophila melanogaster

23 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Nop60B none 0.083605442   19067489
Lipid storage Nop60B none 0.368116704   19067489
Cell size and cell-cycle regulation (1) Nop60B none sp   16496002
Mutant human huntingtin aggregation Nop60B Increased mutant human huntingtin aggregation 1.5 - 2   19789644
Muscle morphogenesis and function (1) Nop60B none np   20220848
Muscle morphogenesis and function (1) Nop60B Lethal np   20220848
Muscle morphogenesis and function (1) Nop60B Lethal np   20220848
Muscle morphogenesis and function (1) Nop60B Lethal np   20220848
Heat nociception (1) Nop60B none 0.72   21074052
Heart development and function (1) Nop60B none 1   20371351
Heart development and function (1) Nop60B none 1   20371351
Heart development and function (2) Nop60B none 2.18   20371351
Serratia marcescens infection (1) Nop60B none 0.257142857142857   19520911
Serratia marcescens infection (1) Nop60B none 0.21875   19520911
Notch pathway regulation (4) Nop60B Bristle morphology defects, notum malformation migration sp   19363474
Notch pathway regulation (4) Nop60B Notum malformation death 8   19363474
Notch pathway regulation (4) Nop60B Bristle morphology defects, notum malformation death sp   19363474
Self-renewal and differentiation in neural stem cells Nop60B Neuroblast smaller cell size, neuroblast less large cells, ganglion mother cell shorter lineages, neuroblast loss, neuroblast loss with smaller neuroblast cell size, neuroblasts smaller, neuroblast underproliferation, lethal sp   21549331
Self-renewal and differentiation in neural stem cells Nop60B Neuroblast smaller cell size, neuroblast less large cells, ganglion mother cell shorter lineages, neuroblast loss, neuroblast loss with smaller neuroblast cell size, neuroblasts smaller, neuroblast underproliferation, lethal sp   21549331
Self-renewal and differentiation in neural stem cells Nop60B Neuroblast smaller cell size, neuroblast less large cells, ganglion mother cell shorter lineages, neuroblast loss, neuroblast loss with smaller neuroblast cell size, neuroblasts smaller, neuroblast underproliferation, lethal sp   21549331
Adiposity regulation (1) Nop60B none -0.17   20074523
Adiposity regulation (1) Nop60B none -0.034   20074523
Hippo pathway regulation Nop60B none 0.24   23263283

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