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Gene : lat D. melanogaster

DB identifier  ? FBgn0005654 Secondary Identifier  ? CG4088
Name  ? latheo Source  FlyBase
  • synonyms:
  • vr6,
  • ORC,
  • l(2)vr6,
  • DmORC3,
  • FBgn0002075,
  • FBgn0005654,
  • ORC3,
  • FBgn0004955,
  • FBan0004088,
  • FBgn0023182,
  • CG4088,
  • Origin recognition complex subunit 3,
  • l(2)49Fd,
  • LAT,
  • vr-6

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41 Alleles

DB identifier Symbol Allele Class Organism
FBal0280309 lat[23G9]   Drosophila melanogaster
FBal0032072 lat[P]   Drosophila melanogaster
FBal0032070 lat[P1] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0129258 lat[EP1168]   Drosophila melanogaster
FBal0032074 lat[lE344] loss of function allele Drosophila melanogaster
FBal0032079 lat[lE49] loss of function allele Drosophila melanogaster
FBal0032064 lat[E1] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0011578 lat[5]   Drosophila melanogaster
FBal0032075 lat[lE34]   Drosophila melanogaster
FBal0011579 lat[6]   Drosophila melanogaster
FBal0097970 lat[+t17.1]   Drosophila melanogaster
FBal0097969 lat[le107]   Drosophila melanogaster
FBal0011575 lat[2]   Drosophila melanogaster
FBal0032060 lat[E14] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0032071 lat[P2]   Drosophila melanogaster
FBal0032061 lat[E16a] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0032078 lat[lE372]   Drosophila melanogaster
FBal0032080 lat[vr6.35]   Drosophila melanogaster
FBal0032065 lat[E4] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0032058 lat[E12] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0032069 lat[E9] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0011574 lat[1]   Drosophila melanogaster
FBal0032062 lat[E16b] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0032067 lat[E6] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0011580 lat[7]   Drosophila melanogaster
FBal0032077 lat[lE357]   Drosophila melanogaster
FBal0032068 lat[E8] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0032073 lat[lE311]   Drosophila melanogaster
FBal0032081 lat[vr6.6] loss of function allele Drosophila melanogaster
FBal0032063 lat[E17] hypomorphic allele - genetic evidence Drosophila melanogaster

14 Clones

Secondary Identifier DB identifier
AT22044 FBcl0017087
bs75f06 FBcl0049801
bs40f03 FBcl0049805
EK110619 FBcl0078868
EK178010 FBcl0079010
GH25393 FBcl0124343
LD45671 FBcl0173211
LP02234 FBcl0187168
LP23279 FBcl0187171
LP14670 FBcl0187177
RE01424 FBcl0221801
192903 FBcl0437378
53936 FBcl0437393
10567 FBcl0437398

10 Exons

DB identifier Symbol
FBgn0005654:4 lat:4
FBgn0005654:3 lat:3
FBgn0005654:2 lat:2
FBgn0005654:1 lat:1
FBgn0005654:10 lat:10
FBgn0005654:9 lat:9
FBgn0005654:8 lat:8
FBgn0005654:7 lat:7
FBgn0005654:6 lat:6
FBgn0005654:5 lat:5

2 Transcripts

DB identifier Gene
FBtr0087769 lat
FBtr0087768 lat

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0087768-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0087769-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0087768-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0087769-3-prime-utr Drosophila melanogaster

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3 Cross References

Identifier
Source . Name

Subject . Primary Identifier
36454, 5740282 NCBI Entrez Gene identifiers FBgn0005654
36454 NCBI Entrez Gene identifiers FBgn0005654
62217 BioGRID FBgn0005654

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 213.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 267.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 173.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 235.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 253.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 697.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 234.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 373.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 371.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 286.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 203.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 170.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 233.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 221.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 229.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 216.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 154.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 406.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 283.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 220.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 395.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 347.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 279.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 135.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 212.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 1340.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 268.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 611.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 332.0
FBgn0005654 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 205.0

9 Introns

DB identifier
Organism . Name
intron_FBgn0005654:10_FBgn0005654:9 Drosophila melanogaster
intron_FBgn0005654:9_FBgn0005654:8 Drosophila melanogaster
intron_FBgn0005654:8_FBgn0005654:7 Drosophila melanogaster
intron_FBgn0005654:7_FBgn0005654:6 Drosophila melanogaster
intron_FBgn0005654:6_FBgn0005654:5 Drosophila melanogaster
intron_FBgn0005654:5_FBgn0005654:3 Drosophila melanogaster
intron_FBgn0005654:3_FBgn0005654:2 Drosophila melanogaster
intron_FBgn0005654:2_FBgn0005654:1 Drosophila melanogaster
intron_FBgn0005654:4_FBgn0005654:3 Drosophila melanogaster

11 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage lat none -0.006871432   19067489
Lipid storage lat none 4.174899459   19067489
Cell size and cell-cycle regulation (1) lat none sp   16496002
Combinatorial effect with methyl methanesulphonate (2) lat Synthetic lethal with methyl methanesulphonate sp   19543366
Heat nociception (1) lat none -0.2   21074052
Heat nociception (1) lat none -0.2   21074052
Heart development and function (1) lat none 1   20371351
Serratia marcescens infection (1) lat none 0.466666666666666   19520911
Self-renewal and differentiation in neural stem cells lat GFP aggregates number, GFP aggregates size, neuroblast less large cells, neuroblast cell shape, ganglion mother cell shorter lineages, neuroblast loss, neuroblast loss with unchanged neuroblast cell size, neuroblast underproliferation, lethal sp   21549331
Hippo pathway regulation lat none -2.66   23263283
Glycosylation regulation (1) lat none sp   21203496

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