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Gene : Hcf D. melanogaster

DB identifier  ? FBgn0039904 Secondary Identifier  ? CG1710
Name  ? Host cell factor Source  FlyBase
  • synonyms:
  • HCF_DROME,
  • anon-WO0172774.48,
  • FBgn0039904,
  • FBan0001710,
  • dHCF,
  • dHcf1,
  • Heat cell factor,
  • FBgn0046383,
  • CG1710,
  • host cell factor,
  • HCF,
  • Hcf1

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13 Alleles

DB identifier Symbol Allele Class Organism
FBal0267506 Hcf[HR1] amorphic allele - molecular evidence Drosophila melanogaster
FBal0249017 Hcf[Scer\UAS.T:Zzzz\FLAG]   Drosophila melanogaster
FBal0266331 Hcf[GL01004]   Drosophila melanogaster
FBal0192248 Hcf[MB01666]   Drosophila melanogaster
FBal0160337 Hcf[e02291]   Drosophila melanogaster
FBal0249307 Hcf[dsRNA.IR-2.Scer\UAS]   Drosophila melanogaster
FBal0249308 Hcf[dsRNA.IR-3.Scer\UAS]   Drosophila melanogaster
FBal0207272 Hcf[GD4353]   Drosophila melanogaster
FBal0248208 Hcf[HMS00452]   Drosophila melanogaster
FBal0231565 Hcf[KK101927]   Drosophila melanogaster
FBal0268456 Hcf[HR2]   Drosophila melanogaster
FBal0267507 Hcf[Scer\UAS.T:Uuuu\T7,T:Zzzz\FLAG]   Drosophila melanogaster
FBal0268511 Hcf[Cter.Scer\UAS.T:Zzzz\FLAG]   Drosophila melanogaster

99 Clones

Secondary Identifier DB identifier
DPiM_LD29768 FBcl0742232
AT16003 FBcl0029359
ESG015c.B21_B04 FBcl0005021
ESG0114a.B21_B03 FBcl0006991
EK128963 FBcl0045124
EK090953 FBcl0045704
EK139746 FBcl0045826
EK173715 FBcl0046084
EK138717 FBcl0046112
EK298913 FBcl0046234
EK292254 FBcl0048688
EK115931 FBcl0048780
EK115927 FBcl0048812
EK211709 FBcl0048822
EK085952 FBcl0048828
EK090255 FBcl0048858
EK089314 FBcl0048864
EK290639 FBcl0048870
EK074009 FBcl0048878
EK055218 FBcl0048886
EK224310 FBcl0048892
EK131910 FBcl0048902
EK209025 FBcl0048908
EK212752 FBcl0048916
EK141026 FBcl0048924
EK208846 FBcl0048944
EK269641 FBcl0048966
EK255141 FBcl0048974
EK162844 FBcl0049026
EK220719 FBcl0049032

19 Exons

DB identifier Symbol
FBgn0039904:1 Hcf:1
FBgn0039904:3 Hcf:3
FBgn0039904:4 Hcf:4
FBgn0039904:5 Hcf:5
FBgn0039904:6 Hcf:6
FBgn0039904:7 Hcf:7
FBgn0039904:9 Hcf:9
FBgn0039904:12 Hcf:12
FBgn0039904:14 Hcf:14
FBgn0039904:15 Hcf:15
FBgn0039904:16 Hcf:16
FBgn0039904:17 Hcf:17
FBgn0039904:19 Hcf:19
FBgn0039904:2 Hcf:2
FBgn0039904:18 Hcf:18
FBgn0039904:8 Hcf:8
FBgn0039904:11 Hcf:11
FBgn0039904:13 Hcf:13
FBgn0039904:10 Hcf:10

4 Transcripts

DB identifier Gene
FBtr0089125 Hcf
FBtr0334479 Hcf
FBtr0089126 Hcf
FBtr0307379 Hcf

8 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0089125-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0089126-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0307379-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0334479-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0089125-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0089126-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0307379-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0334479-3-prime-utr Drosophila melanogaster

Interactions

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Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
43788 NCBI Entrez Gene identifiers FBgn0039904
68622 BioGRID FBgn0039904

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 1136.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 1088.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 909.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 520.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 1283.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 896.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 818.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 717.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 855.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 1576.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 1333.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 925.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1103.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 1300.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 1184.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 1095.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1336.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 1718.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 1357.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 1578.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1317.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 1387.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 1518.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 1329.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 1649.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 2128.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 2206.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 2294.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 2354.0
FBgn0039904 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 1797.0

21 Introns

DB identifier
Organism . Name
intron_FBgn0039904:1_FBgn0039904:3 Drosophila melanogaster
intron_FBgn0039904:3_FBgn0039904:4 Drosophila melanogaster
intron_FBgn0039904:4_FBgn0039904:5 Drosophila melanogaster
intron_FBgn0039904:5_FBgn0039904:6 Drosophila melanogaster
intron_FBgn0039904:6_FBgn0039904:7 Drosophila melanogaster
intron_FBgn0039904:7_FBgn0039904:9 Drosophila melanogaster
intron_FBgn0039904:9_FBgn0039904:12 Drosophila melanogaster
intron_FBgn0039904:12_FBgn0039904:14 Drosophila melanogaster
intron_FBgn0039904:14_FBgn0039904:15 Drosophila melanogaster
intron_FBgn0039904:15_FBgn0039904:16 Drosophila melanogaster
intron_FBgn0039904:16_FBgn0039904:17 Drosophila melanogaster
intron_FBgn0039904:17_FBgn0039904:19 Drosophila melanogaster
intron_FBgn0039904:2_FBgn0039904:3 Drosophila melanogaster
intron_FBgn0039904:7_FBgn0039904:10 Drosophila melanogaster
intron_FBgn0039904:10_FBgn0039904:12 Drosophila melanogaster
intron_FBgn0039904:17_FBgn0039904:18 Drosophila melanogaster
intron_FBgn0039904:6_FBgn0039904:8 Drosophila melanogaster
intron_FBgn0039904:8_FBgn0039904:9 Drosophila melanogaster
intron_FBgn0039904:9_FBgn0039904:11 Drosophila melanogaster
intron_FBgn0039904:11_FBgn0039904:13 Drosophila melanogaster
intron_FBgn0039904:13_FBgn0039904:14 Drosophila melanogaster

19 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Hcf none 1.940833818   19067489
Lipid storage Hcf none 1.355626855   19067489
Cell size and cell-cycle regulation (1) Hcf none sp   16496002
Cell size and cell-cycle regulation (1) Hcf none sp   16496002
Cell size and cell-cycle regulation (1) Hcf none sp   16496002
Dendrite pattern formation Hcf none np   16547170
Heat nociception (1) Hcf none 0.43   21074052
Heart development and function (1) Hcf none 0.7   20371351
Notch induced transcription Hcf Downregulation of Notch pathway after Notch stimulation -2.7862 N(delta)ecn Notch stimulation 20959007
Notch induced transcription Hcf none -0.74679 N(delta)ecn Notch stimulation 20959007
Notch induced transcription Hcf none -1.1938 without Notch stimulation 20959007
Secretory pathway regulation Hcf Decreased BiP signal peptide and firefly luciferase fusion protein expression (-2) - (-1.5)   19942856
RTK-Ras-ERK pathway regulation (1) Hcf none -0.22 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) Hcf none -0.47 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) Hcf none 0.26 30 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) Hcf Increased ERK phosphorylation after sSpitz and EGF stimulation 2.28 10 minutes sSpitz stimulation 22028469
Hippo pathway regulation Hcf none 1.03   23263283
Srp/Lz-induced transcriptional activation Hcf Increased Srp/Lz-induced transcription 5.32   20368357
Glycosylation regulation (1) Hcf none sp   21203496

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