modENCODE |  Help |  blog

Gene : grass D. melanogaster

DB identifier  ? FBgn0039494 Secondary Identifier  ? CG5896
Name  ? Gram-positive Specific Serine protease Source  FlyBase
  • synonyms:
  • c-SP1,
  • Gram-positive-specific serine protease,
  • FBgn0039494,
  • gram-positive specific serine protease,
  • FBan0005896,
  • CG5896,
  • Grass,
  • SP1,
  • SP2

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

8 Alleles

DB identifier Symbol Allele Class Organism
FBal0196031 grass[dsRNA.IR.Scer\UAS]   Drosophila melanogaster
FBal0245253 grass[Scer\UAS.cCa]   Drosophila melanogaster
FBal0245254 grass[dsRNA.Scer\UAS]   Drosophila melanogaster
FBal0240606 grass[Herrade]   Drosophila melanogaster
FBal0278774 grass[GL01335]   Drosophila melanogaster
FBal0209653 grass[GD5171]   Drosophila melanogaster
FBal0237180 grass[KK111050]   Drosophila melanogaster
FBal0274884 grass[NIG.5896R]   Drosophila melanogaster

24 Clones

Secondary Identifier DB identifier
DPiM_LP02963 FBcl0741041
ESG013a.E21.1_B11 FBcl0012053
AT13889 FBcl0035503
HL07375 FBcl0150724
LP02963 FBcl0191431
RH61984 FBcl0273550
RH08883 FBcl0273552
RH04868 FBcl0273553
RH28418 FBcl0273554
RH38040 FBcl0273561
RH12726 FBcl0273563
RH28611 FBcl0273564
RH50567 FBcl0273565
RH66111 FBcl0273568
SD15150 FBcl0288838
EC051181 FBcl0300408
EC052191 FBcl0300409
EC055816 FBcl0300410
EC054193 FBcl0300411
EC052185 FBcl0300412
58802 FBcl0394937
RP004480331 FBcl0568525
RP004546225 FBcl0568526
100126 FBcl0417572

7 Exons

DB identifier Symbol
FBgn0039494:2 grass:2
FBgn0039494:4 grass:4
FBgn0039494:5 grass:5
FBgn0039494:6 grass:6
FBgn0039494:7 grass:7
FBgn0039494:1 grass:1
FBgn0039494:3 grass:3

2 Transcripts

DB identifier Gene
FBtr0085111 grass
FBtr0085112 grass

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0085111-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0085112-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085111-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085112-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

0 Pathways

1 Cross References

Identifier
Source . Name

Subject . Primary Identifier
43273 NCBI Entrez Gene identifiers FBgn0039494

9 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 105.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 298.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 299.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 569.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 454.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 309.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 110.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 1126.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 160.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 385.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 275.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 154.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 254.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 440.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 427.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 230.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 151.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 136.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 43.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 192.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 194.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 811.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 363.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 622.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 191.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 104.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 185.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 125.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 149.0
FBgn0039494 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 241.0

6 Introns

DB identifier
Organism . Name
intron_FBgn0039494:2_FBgn0039494:4 Drosophila melanogaster
intron_FBgn0039494:4_FBgn0039494:5 Drosophila melanogaster
intron_FBgn0039494:5_FBgn0039494:6 Drosophila melanogaster
intron_FBgn0039494:6_FBgn0039494:7 Drosophila melanogaster
intron_FBgn0039494:1_FBgn0039494:3 Drosophila melanogaster
intron_FBgn0039494:3_FBgn0039494:4 Drosophila melanogaster

16 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage grass none -0.458044862   19067489
Lipid storage grass none 1.559193921   19067489
Cell size and cell-cycle regulation (1) grass none sp   16496002
Cell size and cell-cycle regulation (1) grass none sp   16496002
Muscle morphogenesis and function (1) grass none np   20220848
Muscle morphogenesis and function (1) grass none np   20220848
Heat nociception (1) grass none -1.17   21074052
Serratia marcescens infection (1) grass none 0.366666666666666   19520911
Notch pathway regulation (4) grass none 0   19363474
Notch pathway regulation (4) grass none 0   19363474
Toll activation by gram-positive bacteria (1) grass Increased Enterococcus faecalis infection np   16631589
Toll activation by gram-positive bacteria (2) grass Decreased Drosomycin mRNA expression after Micrococcus luteus infection np   16631589
Viability after serine protease inactivation (1) grass Viable np   16631589
Adiposity regulation (1) grass none -0.041   20074523
Hippo pathway regulation grass none 0.55   23263283
Glycosylation regulation (1) grass none sp   21203496

0 Submissions