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Gene : Clk D. melanogaster

DB identifier  ? FBgn0023076 Secondary Identifier  ? CG7391
Name  ? Clock Source  FlyBase
  • synonyms:
  • FBan0007391,
  • dCLK,
  • bHLHe10,
  • dCLOCK,
  • Jerk,
  • PAS1,
  • Jrk,
  • CG7391,
  • dCLK/JRK,
  • FBgn0023076,
  • dClck,
  • CLK,
  • CLOCK

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30 Alleles

DB identifier Symbol Allele Class Organism
FBal0246365 Clk[T:SV5\V5]   Drosophila melanogaster
FBal0281409 Clk[HMJ02224]   Drosophila melanogaster
FBal0243429 Clk[Z3-0084]   Drosophila melanogaster
FBal0245717 Clk[JF01453]   Drosophila melanogaster
FBal0245718 Clk[JF01454]   Drosophila melanogaster
FBal0160689 Clk[f06808]   Drosophila melanogaster
FBal0246467 Clk[Delta1-3.T:SV5\V5]   Drosophila melanogaster
FBal0246468 Clk[Delta1-4.T:SV5\V5]   Drosophila melanogaster
FBal0241182 Clk[DN.Scer\UAS]   Drosophila melanogaster
FBal0287824 Clk[14.8.T:Zzzz\FLAG]   Drosophila melanogaster
FBal0090724 Clk[DeltaQ.Act5C]   Drosophila melanogaster
FBal0137562 Clk[tim.PK]   Drosophila melanogaster
FBal0103081 Clk[Act5C.PS]   Drosophila melanogaster
FBal0145123 Clk[ar]   Drosophila melanogaster
FBal0090723 Clk[Act5C.PD]   Drosophila melanogaster
FBal0090722 Clk[Jrk]   Drosophila melanogaster
FBal0124368 Clk[Act5C.PM]   Drosophila melanogaster
FBal0094862 Clk[unspecified]   Drosophila melanogaster
FBal0160691 Clk[Delta.Act5C.T:SV5\V5,T:Zzzz\His6]   Drosophila melanogaster
FBal0160690 Clk[Delta.Scer\UAS.T:Ivir\HA1]   Drosophila melanogaster
FBal0156779 Clk[Act5C.T:SV5\V5,T:Zzzz\His6]   Drosophila melanogaster
FBal0137563 Clk[per.T:Ivir\HA1]   Drosophila melanogaster
FBal0148098 Clk[Scer\UAS.cZa]   Drosophila melanogaster
FBal0150931 Clk[Scer\UAS.T:Ivir\HA1]   Drosophila melanogaster
FBal0194796 Clk[Act5C.T:Ivir\HA1]   Drosophila melanogaster
FBal0206592 Clk[GD1297]   Drosophila melanogaster
FBal0217750 Clk[dsRNA.Scer\UAS]   Drosophila melanogaster
FBal0235411 Clk[KK108194]   Drosophila melanogaster
FBal0236336 Clk[KK109456]   Drosophila melanogaster
FBal0275553 Clk[NIG.7391R]   Drosophila melanogaster

11 Clones

Secondary Identifier DB identifier
AT07720 FBcl0031733
AT31668 FBcl0031735
AT31214 FBcl0031737
EK222338 FBcl0105302
EK051437 FBcl0105304
HL04223 FBcl0149121
bs61a03 FBcl0353131
Dmel_neb_012656_0397_3175 FBcl0381220
CK01.7B.B1 FBcl0478301
214403.70 FBcl0478306
99635 FBcl0478313

12 Exons

DB identifier Symbol
FBgn0023076:12 Clk:12
FBgn0023076:11 Clk:11
FBgn0023076:9 Clk:9
FBgn0023076:8 Clk:8
FBgn0023076:5 Clk:5
FBgn0023076:4 Clk:4
FBgn0023076:3 Clk:3
FBgn0023076:1 Clk:1
FBgn0023076:10 Clk:10
FBgn0023076:2 Clk:2
FBgn0023076:7 Clk:7
FBgn0023076:6 Clk:6

5 Transcripts

DB identifier Gene
FBtr0076785 Clk
FBtr0100134 Clk
FBtr0100132 Clk
FBtr0334648 Clk
FBtr0334647 Clk

10 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0076785-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0100132-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0100134-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0334647-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0334648-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0076785-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0100132-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0100134-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0334647-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0334648-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
38872 NCBI Entrez Gene identifiers FBgn0023076
64302 BioGRID FBgn0023076

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from UniProt  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 78.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 40.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 230.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 93.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 110.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 144.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 51.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 91.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 158.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 33.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 42.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 208.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 78.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 110.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 264.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 110.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 37.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 82.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 115.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 78.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 50.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 142.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 118.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 97.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 64.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 35.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 149.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 37.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 56.0
FBgn0023076 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 76.0

13 Introns

DB identifier
Organism . Name
intron_FBgn0023076:6_FBgn0023076:5 Drosophila melanogaster
intron_FBgn0023076:5_FBgn0023076:4 Drosophila melanogaster
intron_FBgn0023076:4_FBgn0023076:3 Drosophila melanogaster
intron_FBgn0023076:3_FBgn0023076:2 Drosophila melanogaster
intron_FBgn0023076:3_FBgn0023076:1 Drosophila melanogaster
intron_FBgn0023076:12_FBgn0023076:11 Drosophila melanogaster
intron_FBgn0023076:11_FBgn0023076:9 Drosophila melanogaster
intron_FBgn0023076:9_FBgn0023076:8 Drosophila melanogaster
intron_FBgn0023076:8_FBgn0023076:5 Drosophila melanogaster
intron_FBgn0023076:11_FBgn0023076:10 Drosophila melanogaster
intron_FBgn0023076:10_FBgn0023076:8 Drosophila melanogaster
intron_FBgn0023076:10_FBgn0023076:7 Drosophila melanogaster
intron_FBgn0023076:7_FBgn0023076:5 Drosophila melanogaster

17 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Clk none -0.364816938   19067489
Lipid storage Clk none -0.777334871   19067489
Cell size and cell-cycle regulation (1) Clk none sp   16496002
Dendrite pattern formation Clk none np   16547170
Mutant human huntingtin aggregation Clk Decreased mutant human huntingtin aggregation <= -2   19789644
Muscle morphogenesis and function (1) Clk none np   20220848
Muscle morphogenesis and function (1) Clk none np   20220848
Muscle morphogenesis and function (1) Clk none np   20220848
Heat nociception (1) Clk none -1.17   21074052
Heart development and function (1) Clk none 1   20371351
Heart development and function (1) Clk none 1   20371351
Serratia marcescens infection (1) Clk none 0.4375   19520911
Notch pathway regulation (4) Clk none 0   19363474
Notch pathway regulation (4) Clk none 0   19363474
Adiposity regulation (1) Clk none -0.493   20074523
Hippo pathway regulation Clk none 0.14   23263283
Glycosylation regulation (1) Clk none sp   21203496

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