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Gene : ro D. melanogaster

DB identifier  ? FBgn0003267 Secondary Identifier  ? CG6348
Name  ? rough Source  FlyBase
  • synonyms:
  • CG6348,
  • Rough,
  • Ro,
  • FBan0006348,
  • FBgn0003267,
  • DROROUGH

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72 Alleles

DB identifier Symbol Allele Class Organism
FBal0247713 ro[MI00694]   Drosophila melanogaster
FBal0014634 ro[pi13]   Drosophila melanogaster
FBal0014629 ro[1]   Drosophila melanogaster
FBal0056231 ro[R52C]   Drosophila melanogaster
FBal0014632 ro[4]   Drosophila melanogaster
FBal0039843 ro[hs.sev2]   Drosophila melanogaster
FBal0044319 ro[hs.2sev]   Drosophila melanogaster
FBal0044320 ro[hs.PB]   Drosophila melanogaster
FBal0035519 ro[+t8.6]   Drosophila melanogaster
FBal0044321 ro[hs.sev1]   Drosophila melanogaster
FBal0056236 ro[E19K] loss of function allele Drosophila melanogaster
FBal0051208 ro[+t6.8]   Drosophila melanogaster
FBal0032586 ro[hs.PI]   Drosophila melanogaster
FBal0046367 ro[sev.PI]   Drosophila melanogaster
FBal0051207 ro[+tHa]   Drosophila melanogaster
FBal0056234 ro[H3]   Drosophila melanogaster
FBal0056241 ro[C3]   Drosophila melanogaster
FBal0056242 ro[C2]   Drosophila melanogaster
FBal0056256 ro[+tC6]   Drosophila melanogaster
FBal0056257 ro[+tC5]   Drosophila melanogaster
FBal0056258 ro[+tC4]   Drosophila melanogaster
FBal0056259 ro[+t5.8]   Drosophila melanogaster
FBal0056253 ro[184a]   Drosophila melanogaster
FBal0056237 ro[CC1.2]   Drosophila melanogaster
FBal0104434 ro[sev.PII]   Drosophila melanogaster
FBal0104435 ro[hs.PII]   Drosophila melanogaster
FBal0046365 ro[K81-5]   Drosophila melanogaster
FBal0032585 ro[x63] loss of function allele, amorphic allele - genetic evidence Drosophila melanogaster
FBal0014631 ro[3]   Drosophila melanogaster
FBal0178184 ro[t1.781]   Drosophila melanogaster

3 Clones

Secondary Identifier DB identifier
EK248711 FBcl0140940
IP01518 FBcl0293767
146269 FBcl0414943

5 Exons

DB identifier Symbol
FBgn0003267:4 ro:4
FBgn0003267:3 ro:3
FBgn0003267:2 ro:2
FBgn0003267:5 ro:5
FBgn0003267:1 ro:1

2 Transcripts

DB identifier Gene
FBtr0085091 ro
FBtr0085090 ro

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0085090-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0085091-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085090-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085091-3-prime-utr Drosophila melanogaster

Interactions

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Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
43234 NCBI Entrez Gene identifiers FBgn0003267
68125 BioGRID FBgn0003267

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from UniProt  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 29.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 44.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 34.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 0.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 0.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 27.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 0.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 10.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 53.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 96.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 0.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 0.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 0.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 27.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 0.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 92.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 12.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 0.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 2.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 3.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 10.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 47.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 11.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 2.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 62.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 0.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 36.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 0.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 17.0
FBgn0003267 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 7.0

4 Introns

DB identifier
Organism . Name
intron_FBgn0003267:5_FBgn0003267:3 Drosophila melanogaster
intron_FBgn0003267:3_FBgn0003267:1 Drosophila melanogaster
intron_FBgn0003267:4_FBgn0003267:3 Drosophila melanogaster
intron_FBgn0003267:3_FBgn0003267:2 Drosophila melanogaster

17 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage ro none -0.193113718   19067489
Lipid storage ro none 0.534333876   19067489
ERK signaling ro ERK activation increased weak   17086199
Dendrite pattern formation ro none np   16547170
Mutant human huntingtin aggregation ro Decreased mutant human huntingtin aggregation <= -2   19789644
Muscle morphogenesis and function (1) ro Lethal np   20220848
Heat nociception (1) ro none 0.9   21074052
Regulated secretory pathway biogenesis (1) ro none -0.3   21149569
Heart development and function (1) ro none 1   20371351
Serratia marcescens infection (1) ro none 0.561643835616438   19520911
Notch pathway regulation (4) ro Completely lethal (pupal) sp   19363474
Adiposity regulation (1) ro none -0.087   20074523
RTK-Ras-ERK pathway regulation (1) ro Decreased ERK phosphorylation after EGF stimulation -2.06 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) ro Decreased ERK phosphorylation after EGF stimulation -1.55 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) ro none -0.65 30 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) ro none 0.48 10 minutes sSpitz stimulation 22028469
Hippo pathway regulation ro none 0.36   23263283

0 Submissions