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Gene : sec5 D. melanogaster

DB identifier  ? FBgn0031537 Secondary Identifier  ? CG8843
Name  ? sec5 Source  FlyBase
  • synonyms:
  • Sec-5,
  • FBan0008843,
  • Sec5p,
  • FBgn0031537,
  • dsec5,
  • SEC5,
  • CG8843

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10 Alleles

DB identifier Symbol Allele Class Organism
FBal0195989 sec5[dsRNA.cSa]   Drosophila melanogaster
FBal0246942 sec5[ts1]   Drosophila melanogaster
FBal0146820 sec5[E13] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0146822 sec5[+t11.0]   Drosophila melanogaster
FBal0151498 sec5[unspecified]   Drosophila melanogaster
FBal0146821 sec5[E10] loss of function allele Drosophila melanogaster
FBal0230406 sec5[Scer\UAS.T:Avic\GFP]   Drosophila melanogaster
FBal0242265 sec5[JF02676]   Drosophila melanogaster
FBal0210551 sec5[GD13789]   Drosophila melanogaster
FBal0276175 sec5[NIG.8843R]   Drosophila melanogaster

13 Clones

Secondary Identifier DB identifier
AT01067 FBcl0042441
EK185545 FBcl0042758
EP10550 FBcl0089045
GH10912 FBcl0133865
GH25338 FBcl0134149
GM05361 FBcl0137285
LP18846 FBcl0190810
RE05377 FBcl0235707
RE21569 FBcl0235834
SD03467 FBcl0291485
SD23132 FBcl0291493
SD18760 FBcl0291495
SD26741 FBcl0291496

4 Exons

DB identifier Symbol
FBgn0031537:1 sec5:1
FBgn0031537:2 sec5:2
FBgn0031537:3 sec5:3
FBgn0031537:4 sec5:4

1 Transcripts

DB identifier Gene
FBtr0077519 sec5

2 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0077519-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0077519-3-prime-utr Drosophila melanogaster

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3 Cross References

Identifier
Source . Name

Subject . Primary Identifier
33563 NCBI Entrez Gene identifiers FBgn0031537
36956 NCBI Entrez Gene identifiers FBgn0031537
59774 BioGRID FBgn0031537

8 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 376.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 588.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 472.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 543.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 519.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 166.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 482.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 474.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 178.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 542.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 459.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 361.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 457.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 477.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 338.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 529.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 485.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 450.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 739.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 357.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 665.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 435.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 381.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 400.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 438.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 458.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 183.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 248.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 289.0
FBgn0031537 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 258.0

3 Introns

DB identifier
Organism . Name
intron_FBgn0031537:1_FBgn0031537:2 Drosophila melanogaster
intron_FBgn0031537:2_FBgn0031537:3 Drosophila melanogaster
intron_FBgn0031537:3_FBgn0031537:4 Drosophila melanogaster

21 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage sec5 none -2.404346003   19067489
Lipid storage sec5 none 0.403227853   19067489
Cytokinesis sec5 Multi-nucleate cells np   15380073
Intracellular Listeria monocytogenes infection sec5 Decreased GFP protein expression moderate   16020693
Mycobacterial infection (1) - M. fortuitum infection sec5 Decreased M. fortuitum intracellular infection 4.3 measurement after 3 days 16020694
Mycobacterial infection (2) - E. coli phagocytosis sec5 Decreased E. coli phagocytosis np   16020694
Cell size and cell-cycle regulation (1) sec5 none sp   16496002
Microtubule assembly and organization sec5 none np   18463163
Muscle morphogenesis and function (1) sec5 none np   20220848
Muscle morphogenesis and function (1) sec5 none np   20220848
Heat nociception (1) sec5 none -0.82   21074052
Heat nociception (1) sec5 none -0.26   21074052
Heart development and function (1) sec5 none 1   20371351
Heart development and function (2) sec5 Decreased viability 3.46   20371351
Serratia marcescens infection (1) sec5 none 0.704761904761904   19520911
Notch pathway regulation (4) sec5 none 0   19363474
Notch pathway regulation (4) sec5 Completely lethal (pupal) sp   19363474
Adiposity regulation (1) sec5 none -0.485   20074523
Wnt proteins secretion sec5 none -0.4   22094269
Hippo pathway regulation sec5 none -0.35   23263283
Glycosylation regulation (1) sec5 none sp   21203496

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