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Gene : SA D. melanogaster

DB identifier  ? FBgn0020616 Secondary Identifier  ? CG3423
Name  ? Stromalin Source  FlyBase
  • synonyms:
  • SA/Scc3/Stag2,
  • DSA,
  • FBan0003423,
  • FBgn0020616,
  • SCC3,
  • DSA1,
  • cohesin,
  • CG3423,
  • SA,
  • stromalin,
  • DmSA,
  • ESTS:92H2T,
  • FBgn0020933

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8 Alleles

DB identifier Symbol Allele Class Organism
FBal0266234 SA[GL00534]   Drosophila melanogaster
FBal0221162 SA[dsRNA.Sym.Scer\UAS]   Drosophila melanogaster
FBal0257172 SA[HMS00272]   Drosophila melanogaster
FBal0144608 SA[dsRNA.cVa]   Drosophila melanogaster
FBal0246979 SA[su(Hw).T:Avic\GFP-EGFP]   Drosophila melanogaster
FBal0214771 SA[GD10963]   Drosophila melanogaster
FBal0230881 SA[KK100690]   Drosophila melanogaster
FBal0273815 SA[NIG.3423R]   Drosophila melanogaster

29 Clones

Secondary Identifier DB identifier
AT22794 FBcl0019461
AT23637 FBcl0019457
AT16624 FBcl0019459
EK087618 FBcl0030404
EK298859 FBcl0030750
EK064411 FBcl0030868
EK054501 FBcl0030982
EK142633 FBcl0031020
EK064928 FBcl0028442
EP21826 FBcl0079621
EP13030 FBcl0079623
GH23189 FBcl0107783
GH05706 FBcl0107809
LD34181 FBcl0165222
LP03425 FBcl0181122
LP19921 FBcl0181153
CK01.104C.E3 FBcl0395931
CK01.90C.D1 FBcl0396077
CK01.81D.D9 FBcl0396142
CK01.82B.G7 FBcl0396176
31849 FBcl0396183
214277.1 FBcl0396187
CK01.114D.C2 FBcl0396189
CK01.85B.B12 FBcl0396215
CK01.23D.B10 FBcl0396218
CK01.99C.E7 FBcl0396230
EC254773 FBcl0709014
EC253815 FBcl0716339
Dmel_neb_015459_0332_1559 FBcl0373015

10 Exons

DB identifier Symbol
FBgn0020616:8 SA:8
FBgn0020616:1 SA:1
FBgn0020616:2 SA:2
FBgn0020616:3 SA:3
FBgn0020616:4 SA:4
FBgn0020616:5 SA:5
FBgn0020616:6 SA:6
FBgn0020616:7 SA:7
FBgn0020616:9 SA:9
FBgn0020616:10 SA:10

1 Transcripts

DB identifier Gene
FBtr0079349 SA

2 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0079349-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0079349-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
33974 NCBI Entrez Gene identifiers FBgn0020616
60124 BioGRID FBgn0020616

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 552.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 944.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 502.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 549.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 706.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 412.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 794.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 1001.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 368.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 1034.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 621.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 1129.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 501.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 549.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 704.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 499.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 655.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 671.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 544.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 628.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 915.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 611.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 880.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 842.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 522.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 1129.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 302.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 817.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 855.0
FBgn0020616 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 762.0

9 Introns

DB identifier
Organism . Name
intron_FBgn0020616:1_FBgn0020616:2 Drosophila melanogaster
intron_FBgn0020616:2_FBgn0020616:3 Drosophila melanogaster
intron_FBgn0020616:3_FBgn0020616:4 Drosophila melanogaster
intron_FBgn0020616:4_FBgn0020616:5 Drosophila melanogaster
intron_FBgn0020616:5_FBgn0020616:6 Drosophila melanogaster
intron_FBgn0020616:6_FBgn0020616:7 Drosophila melanogaster
intron_FBgn0020616:7_FBgn0020616:8 Drosophila melanogaster
intron_FBgn0020616:8_FBgn0020616:9 Drosophila melanogaster
intron_FBgn0020616:9_FBgn0020616:10 Drosophila melanogaster

16 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage SA none -0.553912626   19067489
Lipid storage SA none -2.667269583   19067489
Cell size and cell-cycle regulation (1) SA none sp   16496002
Notch pathway regulation (1) SA Downregulation of Notch pathway np   20493818
Notch pathway regulation (2) SA none np C96-GAL4 20493818
Notch pathway regulation (2) SA none np en-GAL4 20493818
Notch pathway regulation (2) SA Downregulation of Notch pathway; adult wing margin: notches sp C96-GAL4 20493818
Notch pathway regulation (2) SA Downregulation of Notch pathway; wing disc NRE:EGFP: down; lethal sp en-GAL4 20493818
Notch pathway regulation (2) SA Up- and downregulation of Notch pathway; wing disc size: overgrown; wing disc NRE:EGFP: up; wing disc myrRFP: accumulation sp en-GAL4 20493818
Notch pathway regulation (3) SA Upregulation of Notch pathway np   20493818
RTK-Ras-ERK pathway regulation (1) SA none 0.05 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) SA none 1.45 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) SA Increased ERK phosphorylation after sSpitz and EGF stimulation 1.79 10 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) SA Increased ERK phosphorylation after sSpitz and EGF stimulation 2.62 30 minutes sSpitz stimulation 22028469
Hippo pathway regulation SA none -0.71   23263283
Glycosylation regulation (1) SA none sp   21203496

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