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Gene : Pop2 D. melanogaster

DB identifier  ? FBgn0036239 Secondary Identifier  ? CG5684
Name  ? Pop2 Source  FlyBase
  • synonyms:
  • CG5684,
  • FBgn0036239,
  • CAF1,
  • POP2,
  • FBan0005684

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13 Alleles

DB identifier Symbol Allele Class Organism
FBal0264076 Pop2[MI03498]   Drosophila melanogaster
FBal0241726 Pop2[HM05235]   Drosophila melanogaster
FBal0263511 Pop2[Scer\UAS.P\T.T:Ivir\HA1]   Drosophila melanogaster
FBal0192320 Pop2[MB02463]   Drosophila melanogaster
FBal0161251 Pop2[dsRNA.cTa]   Drosophila melanogaster
FBal0261624 Pop2[CPTI002831]   Drosophila melanogaster
FBal0261767 Pop2[CPTI002818]   Drosophila melanogaster
FBal0240085 Pop2[MB11505]   Drosophila melanogaster
FBal0287180 Pop2[Scer\UAS.ORF]   Drosophila melanogaster
FBal0287181 Pop2[Scer\UAS.ORF.T:Ivir\HA1]   Drosophila melanogaster
FBal0208101 Pop2[GD12804]   Drosophila melanogaster
FBal0223151 Pop2[DG14804]   Drosophila melanogaster
FBal0274790 Pop2[NIG.5684R]   Drosophila melanogaster

142 Clones

Secondary Identifier DB identifier
AT30081 FBcl0037395
AT06420 FBcl0037413
AT30650 FBcl0036331
AT20463 FBcl0037423
AT16785 FBcl0037425
bs24g07 FBcl0056023
bs04d01 FBcl0056031
bs61b05 FBcl0056033
EC37506 FBcl0070497
EK097356 FBcl0078168
EK055143 FBcl0079048
EK267724 FBcl0079458
EK244133 FBcl0079568
EK192524 FBcl0080094
EK063924 FBcl0080230
EK167650 FBcl0081684
EK058907 FBcl0081828
EK157119 FBcl0082220
EK215345 FBcl0082560
EK138338 FBcl0082620
EK235216 FBcl0082842
EK202625 FBcl0083470
EP09031 FBcl0086479
EP19808 FBcl0086985
EN08664 FBcl0100311
EN14910 FBcl0100315
GH06247 FBcl0137123
GM14316 FBcl0147732
LD07106 FBcl0163020
LD16131 FBcl0163045

8 Exons

DB identifier Symbol
FBgn0036239:8 Pop2:8
FBgn0036239:6 Pop2:6
FBgn0036239:4 Pop2:4
FBgn0036239:3 Pop2:3
FBgn0036239:1 Pop2:1
FBgn0036239:7 Pop2:7
FBgn0036239:5 Pop2:5
FBgn0036239:2 Pop2:2

4 Transcripts

DB identifier Gene
FBtr0300272 Pop2
FBtr0076060 Pop2
FBtr0076059 Pop2
FBtr0076058 Pop2

8 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0076060-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0076058-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0076059-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0300272-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0076060-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0076058-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0076059-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0300272-3-prime-utr Drosophila melanogaster

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Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
39366 NCBI Entrez Gene identifiers FBgn0036239
64726 BioGRID FBgn0036239

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 1552.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 1182.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 1442.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 1855.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 1521.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 1215.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1970.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 1240.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 873.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 1462.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 2169.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 1208.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1026.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 1995.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 1542.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 1668.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 2223.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 1417.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 1406.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 1353.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1538.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 1364.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 1326.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 634.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 933.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 4422.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 2536.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 1206.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 1040.0
FBgn0036239 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 1009.0

8 Introns

DB identifier
Organism . Name
intron_FBgn0036239:5_FBgn0036239:2 Drosophila melanogaster
intron_FBgn0036239:8_FBgn0036239:6 Drosophila melanogaster
intron_FBgn0036239:6_FBgn0036239:4 Drosophila melanogaster
intron_FBgn0036239:4_FBgn0036239:3 Drosophila melanogaster
intron_FBgn0036239:3_FBgn0036239:1 Drosophila melanogaster
intron_FBgn0036239:8_FBgn0036239:4 Drosophila melanogaster
intron_FBgn0036239:8_FBgn0036239:7 Drosophila melanogaster
intron_FBgn0036239:7_FBgn0036239:4 Drosophila melanogaster

38 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Pop2 none 3.842514666   19067489
Lipid storage Pop2 none 1.367603523   19067489
ERK signaling Pop2 ERK activation reduced weak   17086199
mRNA decay Pop2 No change np   15766526
Hedgehog signaling Pop2 Decreased Hedgehog reporter activity -3.07   16311596
Constitutive protein secretion and Golgi organization (1) Pop2 Decreased horseradish peroxidase protein expression sp   16452979
Cell size and cell-cycle regulation (1) Pop2 Increased G1 cell size, increased G2 cell size sp   16496002
Cell size and cell-cycle regulation (1) Pop2 none sp   16496002
Cell size and cell-cycle regulation (2) Pop2 none 1.19   16496002
Cell size and cell-cycle regulation (3) Pop2 none 438   16496002
Dendrite pattern formation Pop2 Increased arborization, decreased arborization np   16547170
Muscle morphogenesis and function (1) Pop2 Semi-lethal np   20220848
Heat nociception (1) Pop2 none 0.24   21074052
Heart development and function (1) Pop2 none 1   20371351
Serratia marcescens infection (1) Pop2 Decreased viability after Serratia marcescens infection -2.53097345132743   19520911
Serratia marcescens infection (2) Pop2 none sp   19520911
Serratia marcescens infection (4) Pop2 none sp   19520911
Notch pathway regulation (4) Pop2 Completely lethal (pupal) sp   19363474
PGN-induced dJNK phosphorylation Pop2 Decreased P-JNK protein expression with PGN -2.07 15 min PGN induction 19893628
G2-M DNA damage checkpoint regulation (2) Pop2 Increased histone H3 phosphorylation with bleocin 29.78 with bleocin 21205937
G2-M DNA damage checkpoint regulation (2) Pop2 Increased histone H3 phosphorylation with doxorubicin 43.84 with doxorubicin 21205937
G2-M DNA damage checkpoint regulation (2) Pop2 Increased histone H3 phosphorylation with etoposide 29.79 with etoposide 21205937
G2-M DNA damage checkpoint regulation (2) Pop2 Increased histone H3 phosphorylation after X-ray exposure 53.42 X-ray exposure 21205937
Hh pathway regulation Pop2 Downregulation of Hh pathway -0.252084103184781   17903264
Hh pathway regulation Pop2 none -0.177731046249083   17903264
Self-renewal and differentiation in neural stem cells Pop2 GFP aggregates number, GFP aggregates size, ganglion mother cell shorter lineages, neuroblast underproliferation, lethal sp   21549331
Notch pathway regulation (1) Pop2 Downregulation of Notch pathway np   20493818
Notch pathway regulation (2) Pop2 Lethal very strong en-GAL4 20493818
Notch pathway regulation (2) Pop2 none np C96-GAL4 20493818
Notch pathway regulation (2) Pop2 none np C96-GAL4 20493818

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