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Gene : ninaE D. melanogaster

DB identifier  ? FBgn0002940 Secondary Identifier  ? CG4550
Name  ? neither inactivation nor afterpotential E Source  FlyBase
  • synonyms:
  • Rh-1,
  • Nina E,
  • NinaE,
  • Rhodopsin-1,
  • FBgn0046298,
  • Rh1(ninaE),
  • Rhodopsin1,
  • BEST:GH11778,
  • Dm Rh1,
  • Rh,
  • opsin,
  • Rhodopsin,
  • DRh1,
  • RH1,
  • CG4550,
  • 1F9,
  • Neither inactivation nor afterpotential E,
  • 143283_at,
  • Rhodopsin 1,
  • R,
  • FBgn0002940,
  • Rh1/ninaE,
  • ora,
  • DmRh1,
  • DMELRH1,
  • FBan0004550

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113 Alleles

DB identifier Symbol Allele Class Organism
FBal0263544 ninaE[Scer\UAS.cLa.T:Avic\GFP]   Drosophila melanogaster
FBal0210991 ninaE[Nterm.TM1.MtnA.T:Ecol\lacZ]   Drosophila melanogaster
FBal0210990 ninaE[Nterm.MtnA.T:Ecol\lacZ]   Drosophila melanogaster
FBal0210992 ninaE[Nterm.MtnA.T:Ecol\lacZ,T:Zzzz\TM]   Drosophila melanogaster
FBal0210993 ninaE[Nterm.TM1.MtnA.T:Ecol\lacZ,T:Zzzz\TM]   Drosophila melanogaster
FBal0239881 ninaE[ninaE.cDa.T:Avic\GFP-EGFP]   Drosophila melanogaster
FBal0246753 ninaE[Scer\UAS.T:Avic\GFP]   Drosophila melanogaster
FBal0258391 ninaE[Scer\UAS.cSa]   Drosophila melanogaster
FBal0241242 ninaE[+t2.747]   Drosophila melanogaster
FBal0241243 ninaE[P37H]   Drosophila melanogaster
FBal0241244 ninaE[P37H.T:Hsim\gD]   Drosophila melanogaster
FBal0246792 ninaE[A315S]   Drosophila melanogaster
FBal0283011 ninaE[hs.T:Avic\GFP-EGFP]   Drosophila melanogaster
FBal0246793 ninaE[A315C]   Drosophila melanogaster
FBal0260920 ninaE[Scer\UAS.T:Avic\GFP-EGFP.T:Zzzz\His6]   Drosophila melanogaster
FBal0245703 ninaE[JF01438]   Drosophila melanogaster
FBal0245704 ninaE[JF01439]   Drosophila melanogaster
FBal0260591 ninaE[AAXXA]   Drosophila melanogaster
FBal0265962 ninaE[Scer.UAS.cVa]   Drosophila melanogaster
FBal0266161 ninaE[318]   Drosophila melanogaster
FBal0013007 ninaE[2]   Drosophila melanogaster
FBal0230420 ninaE[DeltaH8Deltact.Scer\UAS.T:Avic\GFP-EGFP]   Drosophila melanogaster
FBal0230416 ninaE[fl.Scer\UAS.T:Avic\GFP-EGFP]   Drosophila melanogaster
FBal0230417 ninaE[Deltact.Scer\UAS.T:Avic\GFP-EGFP]   Drosophila melanogaster
FBal0230418 ninaE[CC.Scer\UAS.T:Avic\GFP-EGFP]   Drosophila melanogaster
FBal0230419 ninaE[LAL.Scer\UAS.T:Avic\GFP-EGFP]   Drosophila melanogaster
FBal0046183 ninaE[S95F]   Drosophila melanogaster
FBal0035278 ninaE[+tOa]   Drosophila melanogaster
FBal0032281 ninaE[DeltaAsn20]   Drosophila melanogaster
FBal0046167 ninaE[C123Y]   Drosophila melanogaster

1474 Clones

Secondary Identifier DB identifier
RH18475 FBcl0321625
RH40445 FBcl0321626
RH40662 FBcl0321627
GH10543 FBcl0320746
GH26332 FBcl0320989
GH10569 FBcl0320747
GH26771 FBcl0320995
GH27189 FBcl0321001
GH27863 FBcl0321007
RH40681 FBcl0321628
RH41902 FBcl0321641
RH41948 FBcl0321642
RH42232 FBcl0321646
RH42080 FBcl0321643
RH42115 FBcl0321644
RH42219 FBcl0321645
GH10581 FBcl0320748
GH27870 FBcl0321008
GH10604 FBcl0320749
RH33991 FBcl0321015
RH33993 FBcl0321016
GH10991 FBcl0320750
RH34437 FBcl0321023
RH34519 FBcl0321024
RH34535 FBcl0321025
GH11264 FBcl0320751
RH34574 FBcl0321026
RH34624 FBcl0321027
RH34661 FBcl0321028
RH42780 FBcl0321654

5 Exons

DB identifier Symbol
FBgn0002940:5 ninaE:5
FBgn0002940:4 ninaE:4
FBgn0002940:3 ninaE:3
FBgn0002940:2 ninaE:2
FBgn0002940:1 ninaE:1

1 Transcripts

DB identifier Gene
FBtr0083857 ninaE

2 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0083857-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0083857-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
42367 NCBI Entrez Gene identifiers FBgn0002940
67356 BioGRID FBgn0002940

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 69.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 112.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 93.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 61.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 82.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 209.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 43.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 51.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 89.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 15.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 33.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 120.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 70.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 104.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 117.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 61.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 82.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 119.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 101.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 27.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 93.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 121.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 95.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 63.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 85.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 253.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 108.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 119.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 55.0
FBgn0002940 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 74.0

4 Introns

DB identifier
Organism . Name
intron_FBgn0002940:5_FBgn0002940:4 Drosophila melanogaster
intron_FBgn0002940:4_FBgn0002940:3 Drosophila melanogaster
intron_FBgn0002940:3_FBgn0002940:2 Drosophila melanogaster
intron_FBgn0002940:2_FBgn0002940:1 Drosophila melanogaster

17 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage ninaE none -0.056300852   19067489
Lipid storage ninaE none -2.01794368   19067489
Cell size and cell-cycle regulation (1) ninaE none sp   16496002
Cell size and cell-cycle regulation (1) ninaE none sp   16496002
Brucella melitensis infection ninaE none 122.05   18654626
Muscle morphogenesis and function (1) ninaE none np   20220848
Muscle morphogenesis and function (1) ninaE none np   20220848
Heat nociception (1) ninaE Increased noxious heat avoidance 2.19   21074052
Heat nociception (1) ninaE none 0.38   21074052
Heart development and function (1) ninaE none 1   20371351
Serratia marcescens infection (1) ninaE none 0.211764705882352   19520911
Notch pathway regulation (4) ninaE none 0   19363474
Notch pathway regulation (4) ninaE none 0   19363474
Adiposity regulation (1) ninaE none 0.286   20074523
Blood cell homeostasis regulation (1) ninaE none np   20540764
Blood cell homeostasis regulation (2) ninaE none np   20540764
Glycosylation regulation (1) ninaE Decreased Chp protein expression np   21203496

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