modENCODE |  Help |  blog

Gene : Lsd-2 D. melanogaster
DB identifier  ? FBgn0030608 Secondary Identifier  ? CG9057
Name  ? Lipid storage droplet-2 Source  FlyBase
  • synonyms:
  • 145098_at,
  • Lipid Storage Droplet 2 Gene,
  • Lipid Storage Droplet protein 2,
  • PLIN2,
  • Lipid storage droplet 2,
  • FBan0009057,
  • CG9057,
  • lipid storage droplet-2,
  • LSD2,
  • FBgn0030608,
  • LSD-2
Paste the following link
Lists
This Gene is in 2 lists:
Fly classIa (363)
Fly classI (1496)

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

28 Alleles

DB identifier Symbol Allele Class Organism
FBal0211013 Lsd-2[Ubi-p63E.T:Disc\RFP]   Drosophila melanogaster
FBal0280213 Lsd-2[Scer\UAS.T:Avic\GFP-EYFP]   Drosophila melanogaster
FBal0280214 Lsd-2[Scer\UAS.T:Disc\RFP-mCherry]   Drosophila melanogaster
FBal0211701 Lsd-2[CA07051]   Drosophila melanogaster
FBal0257314 Lsd-2[HMS00629]   Drosophila melanogaster
FBal0258639 Lsd-2[NP0141]   Drosophila melanogaster
FBal0182888 Lsd-2[d01209]   Drosophila melanogaster
FBal0182886 Lsd-2[f01370]   Drosophila melanogaster
FBal0182887 Lsd-2[e03329]   Drosophila melanogaster
FBal0257887 Lsd-2[HMS01292]   Drosophila melanogaster
FBal0260646 Lsd-2[EY07971]   Drosophila melanogaster
FBal0131346 Lsd-2[KG00149] loss of function allele Drosophila melanogaster
FBal0147802 Lsd-2[revKG00149]   Drosophila melanogaster
FBal0189588 Lsd-2[BG00016]   Drosophila melanogaster
FBal0147807 Lsd-2[40]   Drosophila melanogaster
FBal0190067 Lsd-2[Delta2]   Drosophila melanogaster
FBal0261856 Lsd-2[CPTI002546]   Drosophila melanogaster
FBal0190355 Lsd-2[Delta1]   Drosophila melanogaster
FBal0152430 Lsd-2[1]   Drosophila melanogaster
FBal0262039 Lsd-2[CPTI001655]   Drosophila melanogaster
FBal0147806 Lsd-2[51]   Drosophila melanogaster
FBal0147803 Lsd-2[Scer\UAS.cGa]   Drosophila melanogaster
FBal0147805 Lsd-2[Scer\UAS.T:Avic\GFP-EGFP]   Drosophila melanogaster
FBal0147804 Lsd-2[Scer\UAS.T:Avic\GFP]   Drosophila melanogaster
FBal0207522 Lsd-2[GD14108]   Drosophila melanogaster
FBal0227693 Lsd-2[5-HA-2178]   Drosophila melanogaster
FBal0227694 Lsd-2[GG01445]   Drosophila melanogaster
FBal0237340 Lsd-2[KK111306]   Drosophila melanogaster

229 Clones

Secondary Identifier DB identifier
UUGC1138 FBcl0006051
ESG014a.E21_F11 FBcl0009669
EC25806 FBcl0063053
EC34932 FBcl0063183
EP06746 FBcl0076503
EP07946 FBcl0076633
EP00953 FBcl0076749
GH23878 FBcl0121135
GH26916 FBcl0121137
GH18395 FBcl0121177
GH27905 FBcl0121213
GH07517 FBcl0121215
GH03463 FBcl0121219
GH11930 FBcl0121223
GH26353 FBcl0121231
GH06230 FBcl0121235
GH27823 FBcl0121251
GH21627 FBcl0121255
GH13252 FBcl0121259
GH26528 FBcl0121273
GH13664 FBcl0121305
GH13652 FBcl0121313
GH07924 FBcl0121351
EK288233 FBcl0131908
EK206948 FBcl0131952
EK264450 FBcl0131958
EK291962 FBcl0131966
EK084705 FBcl0131974
EK307154 FBcl0131994
EK209618 FBcl0132000

5 Exons

DB identifier Symbol
FBgn0030608:5 Lsd-2:5
FBgn0030608:4 Lsd-2:4
FBgn0030608:1 Lsd-2:1
FBgn0030608:3 Lsd-2:3
FBgn0030608:2 Lsd-2:2

4 Transcripts

DB identifier Gene
FBtr0340428 Lsd-2
FBtr0110968 Lsd-2
FBtr0340427 Lsd-2
FBtr0073967 Lsd-2

8 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0110968-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0073967-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0340427-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0340428-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0110968-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0073967-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0340427-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0340428-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

0 Pathways

2 Cross References

Identifier
Source . Name
Subject . Primary Identifier
32437 NCBI Entrez Gene identifiers FBgn0030608
58792 BioGRID FBgn0030608

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier
Submission . Title
Cell Line . Name
Developmental Stage . Name 		Score
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 1557.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 2141.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 1010.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 3437.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 1426.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 1646.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1183.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 125.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 109.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 1538.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 1569.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 856.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1639.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 1134.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 1648.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 2486.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1924.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 505.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 1908.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 2186.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1761.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 2227.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 1613.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 143.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 2281.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 8439.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 2674.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 728.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 837.0
FBgn0030608 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 950.0

7 Introns

DB identifier
Organism . Name
intron_FBgn0030608:5_FBgn0030608:4 Drosophila melanogaster
intron_FBgn0030608:4_FBgn0030608:1 Drosophila melanogaster
intron_FBgn0030608:4_FBgn0030608:3 Drosophila melanogaster
intron_FBgn0030608:3_FBgn0030608:1 Drosophila melanogaster
intron_FBgn0030608:4_FBgn0030608:2 Drosophila melanogaster
intron_FBgn0030608:2_FBgn0030608:1 Drosophila melanogaster
intron_FBgn0030608:3_FBgn0030608:2 Drosophila melanogaster

20 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Lsd-2 Decreased lipid droplet area -3.614282996   19067489
Lipid storage Lsd-2 Decreased lipid droplet area -1.478065122   19067489
Lipid storage Lsd-2 Decreased lipid droplet area -0.9496789   19067489
Lipid storage Lsd-2 Decreased lipid droplet area -1.838246566   19067489
Constitutive protein secretion and Golgi organization (1) Lsd-2 Decreased horseradish peroxidase protein expression sp   16452979
Constitutive protein secretion and Golgi organization (2) Lsd-2 none np   16452979
Cell size and cell-cycle regulation (1) Lsd-2 none sp   16496002
Muscle morphogenesis and function (1) Lsd-2 Flightless np   20220848
Muscle morphogenesis and function (1) Lsd-2 none np   20220848
Muscle morphogenesis and function (4) Lsd-2 Frayed myofibrils, fuzzy (broadened) Z-line np   20220848
Heat nociception (1) Lsd-2 none -0.31   21074052
Heart development and function (1) Lsd-2 none 1   20371351
Serratia marcescens infection (1) Lsd-2 none -0.223880597014925   19520911
Notch pathway regulation (4) Lsd-2 Notum malformation death 4   19363474
Notch pathway regulation (4) Lsd-2 Notum malformation death 9   19363474
Notch pathway regulation (4) Lsd-2 Upregulation of Notch pathway; delay of larval development; wing disc size: overgrown; wing disc NRE:EGFP: up, ectopic; wing disc myrRFP: accumulation, reduced sp en-GAL4 20493818
Notch pathway regulation (4) Lsd-2 Upregulation of Notch pathway; delay of larval development; wing disc size: overgrown; wing disc NRE:EGFP: up; wing disc myrRFP: accumulation, reduced sp en-GAL4 20493818
Adiposity regulation (1) Lsd-2 none -0.561   20074523
Hippo pathway regulation Lsd-2 none -0.9   23263283
Glycosylation regulation (1) Lsd-2 none sp   21203496

0 Submissions





© 2002 - 2013 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom