modENCODE |  Help |  blog

Gene : robo3 D. melanogaster

DB identifier  ? FBgn0041097 Secondary Identifier  ? CG5423
Name  ? robo3 Source  FlyBase
  • synonyms:
  • FBgn0041097,
  • ROBO3,
  • CG14345,
  • FBan0005423,
  • CG5423,
  • Robo-3,
  • FBgn0031330,
  • FBgn0031328,
  • Robo 3,
  • Roundabout 3,
  • CT17158,
  • dRobo-3

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

28 Alleles

DB identifier Symbol Allele Class Organism
FBal0218955 robo3[unspecified]   Drosophila melanogaster
FBal0178180 robo3[f06282]   Drosophila melanogaster
FBal0284774 robo3[Scer\UAS.T:Avic\GFP-EGFP]   Drosophila melanogaster
FBal0260728 robo3[3] amorphic allele - molecular evidence Drosophila melanogaster
FBal0284775 robo3[Scer\UAS.T:Disc\RFP-mRFP]   Drosophila melanogaster
FBal0121546 robo3[Scer\UAS.T:Ivir\HA1,T:SS-wg]   Drosophila melanogaster
FBal0277574 robo3[MI06181]   Drosophila melanogaster
FBal0192862 robo3[MB00495]   Drosophila melanogaster
FBal0121544 robo3[a.cSa]   Drosophila melanogaster
FBal0121543 robo3[cSa]   Drosophila melanogaster
FBal0121547 robo3[1] loss of function allele Drosophila melanogaster
FBal0178181 robo3[dsRNA.Scer\UAS]   Drosophila melanogaster
FBal0121545 robo3[Scer\UAS.cSa]   Drosophila melanogaster
FBal0175533 robo3[Scer\UAS.T:Hsap\MYC]   Drosophila melanogaster
FBal0243817 robo3[robo3.Scer\SceI.RS]   Drosophila melanogaster
FBal0243818 robo3[robo3.HR.T:Ivir\HA1]   Drosophila melanogaster
FBal0243819 robo3[KO.robo]   Drosophila melanogaster
FBal0243820 robo3[KO.lea]   Drosophila melanogaster
FBal0243821 robo3[robo.Scer\SceI.RS]   Drosophila melanogaster
FBal0243822 robo3[robo.HR.T:Ivir\HA1]   Drosophila melanogaster
FBal0243823 robo3[lea.Scer\SceI.RS]   Drosophila melanogaster
FBal0243824 robo3[lea.HR.T:Ivir\HA1]   Drosophila melanogaster
FBal0243825 robo3[robo.T:Ivir\HA1]   Drosophila melanogaster
FBal0210483 robo3[GD14351]   Drosophila melanogaster
FBal0215104 robo3[GD77]   Drosophila melanogaster
FBal0215103 robo3[GD2573]   Drosophila melanogaster
FBal0242506 robo3[JF03331]   Drosophila melanogaster
FBal0222774 robo3[f06270]   Drosophila melanogaster

7 Clones

Secondary Identifier DB identifier
ESG0115a.B21_C10 FBcl0007687
EK064618 FBcl0113172
EK223863 FBcl0113192
EK185258 FBcl0113236
EK052019 FBcl0113254
LP22668 FBcl0180197
RT01825 FBcl0701847

13 Exons

DB identifier Symbol
FBgn0041097:1 robo3:1
FBgn0041097:2 robo3:2
FBgn0041097:3 robo3:3
FBgn0041097:4 robo3:4
FBgn0041097:5 robo3:5
FBgn0041097:6 robo3:6
FBgn0041097:7 robo3:7
FBgn0041097:8 robo3:8
FBgn0041097:9 robo3:9
FBgn0041097:10 robo3:10
FBgn0041097:11 robo3:11
FBgn0041097:12 robo3:12
FBgn0041097:13 robo3:13

2 Transcripts

DB identifier Gene
FBtr0077921 robo3
FBtr0335384 robo3

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0077921-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0335384-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0077921-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0335384-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
33314 NCBI Entrez Gene identifiers FBgn0041097
59565 BioGRID FBgn0041097

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 299.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 185.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 510.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 149.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 119.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 229.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 179.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 187.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 229.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 118.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 136.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 89.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 160.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 145.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 135.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 184.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 188.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 112.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 141.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 353.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 155.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 87.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 230.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 133.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 304.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 206.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 222.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 255.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 158.0
FBgn0041097 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 95.0

12 Introns

DB identifier
Organism . Name
intron_FBgn0041097:1_FBgn0041097:2 Drosophila melanogaster
intron_FBgn0041097:2_FBgn0041097:3 Drosophila melanogaster
intron_FBgn0041097:3_FBgn0041097:4 Drosophila melanogaster
intron_FBgn0041097:4_FBgn0041097:5 Drosophila melanogaster
intron_FBgn0041097:5_FBgn0041097:6 Drosophila melanogaster
intron_FBgn0041097:6_FBgn0041097:7 Drosophila melanogaster
intron_FBgn0041097:7_FBgn0041097:8 Drosophila melanogaster
intron_FBgn0041097:8_FBgn0041097:9 Drosophila melanogaster
intron_FBgn0041097:9_FBgn0041097:10 Drosophila melanogaster
intron_FBgn0041097:10_FBgn0041097:11 Drosophila melanogaster
intron_FBgn0041097:11_FBgn0041097:13 Drosophila melanogaster
intron_FBgn0041097:11_FBgn0041097:12 Drosophila melanogaster

18 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage robo3 none 1.463994091   19067489
Lipid storage robo3 none -1.607989953   19067489
Lipid storage robo3 none 3.286403927   19067489
Lipid storage robo3 none -0.108050957   19067489
Lipid storage robo3 none -0.426104352   19067489
Lipid storage robo3 none 0.104648236   19067489
ERK signaling robo3 ERK activation reduced moderate   17086199
Combinatorial effect with methyl methanesulphonate (1) robo3 none sp   19543366
Muscle morphogenesis and function (1) robo3 none np   20220848
Muscle morphogenesis and function (1) robo3 none np   20220848
Heat nociception (1) robo3 none 0.85   21074052
Heart development and function (1) robo3 none 1   20371351
Notch pathway regulation (4) robo3 none 0   19363474
RTK-Ras-ERK pathway regulation (1) robo3 none 0 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) robo3 none -0.59 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) robo3 none -0.36 10 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) robo3 none -0.36 30 minutes sSpitz stimulation 22028469
Hippo pathway regulation robo3 none -0.97   23263283

0 Submissions