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Gene : Ssrp D. melanogaster

DB identifier  ? FBgn0010278 Secondary Identifier  ? CG4817
Name  ? Structure specific recognition protein Source  FlyBase
  • synonyms:
  • DssRP,
  • Chorion factor,
  • dSSRP1,
  • FBan0004817,
  • Cf5,
  • FBgn0005644,
  • CG4817,
  • structure-specific recognition protein,
  • SSRP,
  • FBgn0010278,
  • SSRP1

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8 Alleles

DB identifier Symbol Allele Class Organism
FBal0241069 Ssrp[G2947]   Drosophila melanogaster
FBal0220609 Ssrp[JF02120]   Drosophila melanogaster
FBal0277919 Ssrp[Scer\UAS.cBa]   Drosophila melanogaster
FBal0150595 Ssrp[dsRNA.cHa]   Drosophila melanogaster
FBal0262847 Ssrp[GL00381]   Drosophila melanogaster
FBal0208641 Ssrp[GD12795]   Drosophila melanogaster
FBal0279286 Ssrp[HMS02285]   Drosophila melanogaster
FBal0274384 Ssrp[NIG.4817R]   Drosophila melanogaster

134 Clones

Secondary Identifier DB identifier
EK295534 FBcl0006618
EK177829 FBcl0006630
EK144330 FBcl0006640
EK179912 FBcl0006658
EK169834 FBcl0006670
AT26951 FBcl0014725
AT15709 FBcl0014749
AT31395 FBcl0014757
EC14863 FBcl0064027
EK165450 FBcl0100980
EK280107 FBcl0101114
GM06375 FBcl0139471
GM08107 FBcl0139485
GM04223 FBcl0139489
GM08028 FBcl0139495
GM32580 FBcl0145027
LD20446 FBcl0159629
LD09673 FBcl0159669
RE41825 FBcl0225826
RE10829 FBcl0225953
RE42862 FBcl0226004
SD06504 FBcl0279622
SD11876 FBcl0279632
FGC026A10 FBcl0386042
FGH001D01 FBcl0386601
FGM316G02 FBcl0393279
FI07619 FBcl0474891
RP003595759 FBcl0650490
RP003309626 FBcl0650476
RP003281555 FBcl0650477

3 Exons

DB identifier Symbol
FBgn0010278:3 Ssrp:3
FBgn0010278:2 Ssrp:2
FBgn0010278:1 Ssrp:1

1 Transcripts

DB identifier Gene
FBtr0072242 Ssrp

2 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0072242-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0072242-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
37767 NCBI Entrez Gene identifiers FBgn0010278
63363 BioGRID FBgn0010278

10 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 1963.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 2263.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 1495.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 2107.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 2084.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 945.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1451.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 2075.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 530.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 2621.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 2383.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 1488.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1111.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 2147.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 1800.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 2122.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1770.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 2140.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 1840.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 1130.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 3016.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 1615.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 1716.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 1190.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 1133.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 2259.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 750.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 1197.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 783.0
FBgn0010278 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 590.0

2 Introns

DB identifier
Organism . Name
intron_FBgn0010278:3_FBgn0010278:2 Drosophila melanogaster
intron_FBgn0010278:2_FBgn0010278:1 Drosophila melanogaster

40 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Ssrp none 0.261365163   19067489
Lipid storage Ssrp none 0.804852972   19067489
ERK signaling Ssrp ERK activation reduced weak   17086199
Cell size and cell-cycle regulation (1) Ssrp none sp   16496002
C. trachomatis infection Ssrp C. trachomatis infection up np   18369471
Lipid storage Ssrp Smaller sized lipid droplets, more dispersed strong   18408709
Muscle morphogenesis and function (1) Ssrp Lethal np   20220848
Muscle morphogenesis and function (1) Ssrp Lethal np   20220848
Muscle morphogenesis and function (3) Ssrp Fading Z-line np   20220848
Heat nociception (1) Ssrp none -0.66   21074052
Heat nociception (1) Ssrp Developmentally lethal 0.38   21074052
Heart development and function (1) Ssrp none 0.67   20371351
Heart development and function (1) Ssrp none 1   20371351
Heart development and function (2) Ssrp none 2.34   20371351
Serratia marcescens infection (1) Ssrp none 1.05882352941176   19520911
Notch pathway regulation (4) Ssrp Completely lethal (pupal) sp   19363474
Notch pathway regulation (4) Ssrp Notum malformation death 9   19363474
Notch induced transcription Ssrp none 2.1027 without Notch stimulation 20959007
Notch induced transcription Ssrp none 0.4727 N(delta)ecn Notch stimulation 20959007
Notch induced transcription Ssrp Downregulation of Notch pathway after Notch stimulation -2.6986 N(delta)ecn Notch stimulation 20959007
Self-renewal and differentiation in neural stem cells Ssrp GFP aggregates number, GFP aggregates size, neuroblast smaller cell size, neuroblast cell shape, ganglion mother cell larger cell size, ganglion mother cell shorter lineages, ganglion mother cell shape, neuroblasts smaller, neuroblast underproliferation, sp   21549331
Self-renewal and differentiation in neural stem cells Ssrp GFP aggregates number, GFP aggregates size, neuroblast smaller cell size, neuroblast cell shape, ganglion mother cell larger cell size, ganglion mother cell longer lineages, ganglion mother cell shorter lineages, neuroblasts smaller, neuroblast overprolif sp   21549331
Pol II elongation Ssrp none 85 20 min heat shock 19279664
Notch pathway regulation (1) Ssrp Downregulation of Notch pathway np   20493818
Notch pathway regulation (2) Ssrp none np C96-GAL4 20493818
Notch pathway regulation (2) Ssrp Upregulation of Notch pathway; wing disc NRE:EGFP: up; wing disc myrRFP: accumulation, reduced; lethal sp en-GAL4 20493818
Notch pathway regulation (3) Ssrp Upregulation of Notch pathway np   20493818
Adiposity regulation (1) Ssrp none -0.336   20074523
Blood cell homeostasis regulation (1) Ssrp Increased melanotic mass formation np   20540764
Blood cell homeostasis regulation (2) Ssrp Increased melanotic mass formation np   20540764

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