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Gene : vtd D. melanogaster

DB identifier  ? FBgn0260987 Secondary Identifier  ? CG17436
Name  ? verthandi Source  FlyBase
  • synonyms:
  • 80Fh,
  • lethal(3)80Fh,
  • DmRAD21,
  • FBan0017436,
  • CG17436,
  • FBgn0260987,
  • CG40222,
  • cohesin,
  • DRAD21,
  • alpha-kleisin,
  • l3,
  • alpha kleisin,
  • FBgn0002297,
  • FBgn0026057,
  • Scc1,
  • FBgn0058222,
  • lethal 3,
  • RAD21,
  • l(3)Lh3,
  • FBgn0027941,
  • l(3)80Fh,
  • FBgn0003993

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45 Alleles

DB identifier Symbol Allele Class Organism
FBal0266222 vtd[GL00522]   Drosophila melanogaster
FBal0263604 vtd[GD4260]   Drosophila melanogaster
FBal0221047 vtd[dsRNA.Sym.Scer\UAS]   Drosophila melanogaster
FBal0123594 vtd[5-3]   Drosophila melanogaster
FBal0123595 vtd[5-2]   Drosophila melanogaster
FBal0123596 vtd[5-1]   Drosophila melanogaster
FBal0123597 vtd[3-1]   Drosophila melanogaster
FBal0123593 vtd[6]   Drosophila melanogaster
FBal0123590 vtd[80Fh-36]   Drosophila melanogaster
FBal0123592 vtd[7]   Drosophila melanogaster
FBal0123598 vtd[12]   Drosophila melanogaster
FBal0123589 vtd[80Fh-5]   Drosophila melanogaster
FBal0124915 vtd[unspecified]   Drosophila melanogaster
FBal0123586 vtd[9]   Drosophila melanogaster
FBal0123600 vtd[10]   Drosophila melanogaster
FBal0010081 vtd[80Fh-1]   Drosophila melanogaster
FBal0018066 vtd[3]   Drosophila melanogaster
FBal0123591 vtd[80Fh-35]   Drosophila melanogaster
FBal0018067 vtd[4]   Drosophila melanogaster
FBal0018065 vtd[2]   Drosophila melanogaster
FBal0018064 vtd[1]   Drosophila melanogaster
FBal0123588 vtd[80Fh-6]   Drosophila melanogaster
FBal0123587 vtd[8]   Drosophila melanogaster
FBal0018068 vtd[5] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0123599 vtd[11]   Drosophila melanogaster
FBal0010082 vtd[80Fh-2]   Drosophila melanogaster
FBal0287451 vtd[Scer\UAS.ORF]   Drosophila melanogaster
FBal0287452 vtd[Scer\UAS.ORF.T:Ivir\HA1]   Drosophila melanogaster
FBal0219554 vtd[14]   Drosophila melanogaster
FBal0248070 vtd[Scer\UAS.T:Ecol\dam.T:Hsap\MYC]   Drosophila melanogaster

19 Clones

Secondary Identifier DB identifier
EP13724 FBcl0077989
LD09474 FBcl0481507
FI15814 FBcl0742644
RE16081 FBcl0481516
LD02527 FBcl0481518
Dmel_dig_008622_0598_2568 FBcl0383533
FI11703 FBcl0718797
RP003495564 FBcl0701094
RP003467869 FBcl0701095
RP003356654 FBcl0701096
RP003570044 FBcl0701097
RP003512451 FBcl0701098
RP003300702 FBcl0701099
RP003215999 FBcl0701100
RP003546778 FBcl0701101
RP003118089 FBcl0701102
RP003543854 FBcl0701103
RP003224056 FBcl0701104
RP003651094 FBcl0701105

9 Exons

DB identifier Symbol
FBgn0260987:1 vtd:1
FBgn0260987:2 vtd:2
FBgn0260987:3 vtd:3
FBgn0260987:4 vtd:4
FBgn0260987:5 vtd:5
FBgn0260987:6 vtd:6
FBgn0260987:8 vtd:8
FBgn0260987:9 vtd:9
FBgn0260987:7 vtd:7

2 Transcripts

DB identifier Gene
FBtr0344093 vtd
FBtr0113746 vtd

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0113746-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0344093-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0113746-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0344093-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
3354896 NCBI Entrez Gene identifiers FBgn0260987
78021 BioGRID FBgn0260987

10 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  

0 Expression Scores

9 Introns

DB identifier
Organism . Name
intron_FBgn0260987:1_FBgn0260987:2 Drosophila melanogaster
intron_FBgn0260987:2_FBgn0260987:3 Drosophila melanogaster
intron_FBgn0260987:3_FBgn0260987:4 Drosophila melanogaster
intron_FBgn0260987:4_FBgn0260987:5 Drosophila melanogaster
intron_FBgn0260987:5_FBgn0260987:6 Drosophila melanogaster
intron_FBgn0260987:6_FBgn0260987:8 Drosophila melanogaster
intron_FBgn0260987:8_FBgn0260987:9 Drosophila melanogaster
intron_FBgn0260987:6_FBgn0260987:7 Drosophila melanogaster
intron_FBgn0260987:7_FBgn0260987:8 Drosophila melanogaster

11 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Cell size and cell-cycle regulation (1) vtd none sp   16496002
Cell size and cell-cycle regulation (1) vtd Decreased G1 DNA content sp   16496002
Cell size and cell-cycle regulation (1) vtd none sp   16496002
Cell size and cell-cycle regulation (2) vtd none 1.311   16496002
Cell size and cell-cycle regulation (3) vtd Decreased cell number 401   16496002
Cell size and cell-cycle regulation (4) vtd none below threshold   16496002
Muscle morphogenesis and function (1) vtd Lethal np   20220848
Muscle morphogenesis and function (1) vtd Lethal np   20220848
Notch pathway regulation (4) vtd Notum malformation death 10   19363474
Hippo pathway regulation vtd none 1.21   23263283
Glycosylation regulation (1) vtd none sp   21203496

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