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Gene : kn D. melanogaster

DB identifier  ? FBgn0001319 Secondary Identifier  ? CG10197
Name  ? knot Source  FlyBase
  • synonyms:
  • coe,
  • CG10197,
  • Collier/Knot,
  • DmCOE,
  • Kn,
  • Col/Kn,
  • FBan0010197,
  • Collier,
  • FBgn0014142,
  • Knot,
  • Collier-Knot,
  • knotted,
  • Col,
  • FBgn0001319,
  • FBgn0033967

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28 Alleles

DB identifier Symbol Allele Class Organism
FBal0267750 kn[Scer\UAS.T:Ivir\HA1]   Drosophila melanogaster
FBal0267751 kn[col85-GAL4]   Drosophila melanogaster
FBal0211025 kn[dsRNA.Scer\UAS]   Drosophila melanogaster
FBal0159113 kn[EY09641]   Drosophila melanogaster
FBal0259778 kn[KK109184]   Drosophila melanogaster
FBal0095471 kn[col-85]   Drosophila melanogaster
FBal0268893 kn[T:Avic\GFP-SF,T:Zzzz\FLAG,T:Zzzz\PSP.CS,T:Zzzz\TEV.CS,T:Zzzz\BLRP]   Drosophila melanogaster
FBal0244884 kn[JF02206]   Drosophila melanogaster
FBal0057685 kn[a.hs]   Drosophila melanogaster
FBal0097024 kn[hs.PS]   Drosophila melanogaster
FBal0097028 kn[+m5]   Drosophila melanogaster
FBal0104595 kn[SA2]   Drosophila melanogaster
FBal0082865 kn[SA1]   Drosophila melanogaster
FBal0005770 kn[1]   Drosophila melanogaster
FBal0097027 kn[col-1] amorphic allele - genetic evidence, loss of function allele Drosophila melanogaster
FBal0082867 kn[KN3]   Drosophila melanogaster
FBal0082869 kn[KN1]   Drosophila melanogaster
FBal0092913 kn[unspecified]   Drosophila melanogaster
FBal0082866 kn[KN4]   Drosophila melanogaster
FBal0082868 kn[KN2]   Drosophila melanogaster
FBal0097026 kn[col-2] loss of function allele Drosophila melanogaster
FBal0097025 kn[col-3] loss of function allele Drosophila melanogaster
FBal0103782 kn[Scer\UAS.cMa]   Drosophila melanogaster
FBal0098725 kn[Scer\UAS.cVa]   Drosophila melanogaster
FBal0194351 kn[t5]   Drosophila melanogaster
FBal0214985 kn[GD4730]   Drosophila melanogaster
FBal0238807 kn[KK114322]   Drosophila melanogaster
FBal0258266 kn[MI02387]   Drosophila melanogaster

38 Clones

Secondary Identifier DB identifier
EK225216 FBcl0020162
EK146441 FBcl0020238
EK068133 FBcl0020250
EK059921 FBcl0020272
EK060540 FBcl0020282
EK071935 FBcl0020294
EK060416 FBcl0020306
EK308146 FBcl0020908
LP01538 FBcl0187780
RE71366 FBcl0224762
RE71320 FBcl0224768
RE29885 FBcl0224794
RE03728 FBcl0224947
RE37371 FBcl0224979
RH09628 FBcl0264100
CK01.102B.G1 FBcl0477870
CK01.77C.B12 FBcl0477750
CK01.77C.D11 FBcl0477825
CK01.92A.A6 FBcl0477866
CK01.86B.A2 FBcl0477872
CK01.76C.G11 FBcl0477878
RP004197458 FBcl0634282
RP004494327 FBcl0634283
RP004421517 FBcl0634285
RP004250178 FBcl0634288
RP004510863 FBcl0634290
RP004416515 FBcl0634291
RP004415877 FBcl0634292
RP004531072 FBcl0634295
RP004463221 FBcl0634298

18 Exons

DB identifier Symbol
FBgn0001319:16 kn:16
FBgn0001319:17 kn:17
FBgn0001319:14 kn:14
FBgn0001319:13 kn:13
FBgn0001319:12 kn:12
FBgn0001319:11 kn:11
FBgn0001319:10 kn:10
FBgn0001319:8 kn:8
FBgn0001319:7 kn:7
FBgn0001319:6 kn:6
FBgn0001319:3 kn:3
FBgn0001319:1 kn:1
FBgn0001319:18 kn:18
FBgn0001319:2 kn:2
FBgn0001319:5 kn:5
FBgn0001319:15 kn:15
FBgn0001319:9 kn:9
FBgn0001319:4 kn:4

5 Transcripts

DB identifier Gene
FBtr0112810 kn
FBtr0112809 kn
FBtr0301400 kn
FBtr0087465 kn
FBtr0329882 kn

9 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0087465-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0112809-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0301400-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0329882-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0087465-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0112809-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0112810-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0301400-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0329882-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
45318 NCBI Entrez Gene identifiers FBgn0001319
69588 BioGRID FBgn0001319

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  
Fly Transcription Factor/microRNA Regulatory Network  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 138.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 192.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 146.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 153.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 85.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 357.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 259.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 80.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 258.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 154.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 65.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 78.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 157.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 148.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 167.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 128.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 104.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 61.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 253.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 285.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 121.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 141.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 84.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 133.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 164.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 142.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 240.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 547.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 420.0
FBgn0001319 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 389.0

21 Introns

DB identifier
Organism . Name
intron_FBgn0001319:17_FBgn0001319:14 Drosophila melanogaster
intron_FBgn0001319:14_FBgn0001319:13 Drosophila melanogaster
intron_FBgn0001319:13_FBgn0001319:12 Drosophila melanogaster
intron_FBgn0001319:12_FBgn0001319:11 Drosophila melanogaster
intron_FBgn0001319:11_FBgn0001319:10 Drosophila melanogaster
intron_FBgn0001319:10_FBgn0001319:8 Drosophila melanogaster
intron_FBgn0001319:8_FBgn0001319:7 Drosophila melanogaster
intron_FBgn0001319:7_FBgn0001319:6 Drosophila melanogaster
intron_FBgn0001319:6_FBgn0001319:3 Drosophila melanogaster
intron_FBgn0001319:3_FBgn0001319:1 Drosophila melanogaster
intron_FBgn0001319:3_FBgn0001319:2 Drosophila melanogaster
intron_FBgn0001319:2_FBgn0001319:1 Drosophila melanogaster
intron_FBgn0001319:7_FBgn0001319:5 Drosophila melanogaster
intron_FBgn0001319:5_FBgn0001319:3 Drosophila melanogaster
intron_FBgn0001319:18_FBgn0001319:16 Drosophila melanogaster
intron_FBgn0001319:16_FBgn0001319:14 Drosophila melanogaster
intron_FBgn0001319:15_FBgn0001319:14 Drosophila melanogaster
intron_FBgn0001319:10_FBgn0001319:9 Drosophila melanogaster
intron_FBgn0001319:9_FBgn0001319:7 Drosophila melanogaster
intron_FBgn0001319:5_FBgn0001319:4 Drosophila melanogaster
intron_FBgn0001319:4_FBgn0001319:1 Drosophila melanogaster

12 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage kn none 0.51999894   19067489
Lipid storage kn none 0.414514997   19067489
Lipid storage kn none -1.858991023   19067489
Lipid storage kn none -0.020929771   19067489
Lipid storage kn none 0.38734969   19067489
Lipid storage kn none -0.122841286   19067489
Cell size and cell-cycle regulation (1) kn none sp   16496002
Dendrite pattern formation kn none np   16547170
Muscle morphogenesis and function (1) kn none np   20220848
Notch pathway regulation (4) kn none 0   19363474
Hippo pathway regulation kn none 0.5   23263283
Muscle development and maintenance kn none sp  

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