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Gene : Cap D. melanogaster

DB identifier  ? FBgn0015615 Secondary Identifier  ? CG9802
Name  ? Chromosome-associated protein Source  FlyBase
  • synonyms:
  • SMC3,
  • DmSMC3,
  • DmSMC3/Cap,
  • CG9802,
  • FBgn0015615,
  • dSMC3,
  • FBan0009802,
  • CAP,
  • cohesin subunit SMC3

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10 Alleles

DB identifier Symbol Allele Class Organism
FBal0266218 Cap[GL00518]   Drosophila melanogaster
FBal0270082 Cap[1]   Drosophila melanogaster
FBal0270083 Cap[Ubi.PM]   Drosophila melanogaster
FBal0198218 Cap[MB04420]   Drosophila melanogaster
FBal0257208 Cap[HMS00318]   Drosophila melanogaster
FBal0286721 Cap[Scer\UAS.ORF]   Drosophila melanogaster
FBal0206515 Cap[GD14684]   Drosophila melanogaster
FBal0230184 Cap[T:Ivir\HA1]   Drosophila melanogaster
FBal0235898 Cap[KK108887]   Drosophila melanogaster
FBal0276573 Cap[NIG.9802R]   Drosophila melanogaster

44 Clones

Secondary Identifier DB identifier
14291 FBcl0442103
EC27804 FBcl0062563
EN04506 FBcl0092107
EK009143 FBcl0117868
EK027944 FBcl0117872
EK041351 FBcl0117876
EK117123 FBcl0117880
EK160226 FBcl0118862
EK174059 FBcl0118874
HL05611 FBcl0149045
RE14758 FBcl0200867
RE73491 FBcl0200918
RE42282 FBcl0201072
IP16426 FBcl0303598
CK01.32C.C8 FBcl0442080
CK01.5D.G12 FBcl0442070
CK01.49D.E6 FBcl0442100
RP004086008 FBcl0507110
RP004515801 FBcl0507112
RP004264299 FBcl0507113
RP004406930 FBcl0507120
RP004197426 FBcl0507121
RP004429481 FBcl0507124
RP004512407 FBcl0507130
RP004541966 FBcl0507134
RP004441473 FBcl0507135
RP004443308 FBcl0507136
RP004247293 FBcl0507137
RP004343792 FBcl0507142
RP004215003 FBcl0507144

5 Exons

DB identifier Symbol
FBgn0015615:5 Cap:5
FBgn0015615:4 Cap:4
FBgn0015615:3 Cap:3
FBgn0015615:2 Cap:2
FBgn0015615:1 Cap:1

1 Transcripts

DB identifier Gene
FBtr0074290 Cap

2 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0074290-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0074290-3-prime-utr Drosophila melanogaster

Interactions

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
32627 NCBI Entrez Gene identifiers FBgn0015615
58965 BioGRID FBgn0015615

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 502.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 515.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 424.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 406.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 386.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 390.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 568.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 605.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 268.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 477.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 450.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 307.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 348.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 294.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 470.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 362.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 431.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 439.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 419.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 400.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 468.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 538.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 406.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 442.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 350.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 1628.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 442.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 778.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 645.0
FBgn0015615 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 494.0

4 Introns

DB identifier
Organism . Name
intron_FBgn0015615:5_FBgn0015615:4 Drosophila melanogaster
intron_FBgn0015615:4_FBgn0015615:3 Drosophila melanogaster
intron_FBgn0015615:3_FBgn0015615:2 Drosophila melanogaster
intron_FBgn0015615:2_FBgn0015615:1 Drosophila melanogaster

29 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Cap none 0.00480935   19067489
Lipid storage Cap none -0.062783186   19067489
Cell size and cell-cycle regulation (1) Cap none sp   16496002
Microtubule assembly and organization Cap none np   18463163
Muscle morphogenesis and function (1) Cap Lethal np   20220848
Muscle morphogenesis and function (1) Cap Lethal np   20220848
Heat nociception (1) Cap Developmentally lethal 0   21074052
Heat nociception (1) Cap Developmentally lethal 0   21074052
Heart development and function (1) Cap none 1   20371351
Heart development and function (1) Cap none 1   20371351
Serratia marcescens infection (1) Cap none -1.23636363636363   19520911
Notch pathway regulation (4) Cap Completely lethal (pupal) sp   19363474
Notch pathway regulation (4) Cap Loss of bristles, hair cell duplication, bristle morphology defects, notum malformation migration, notum malformation death, overproliferation, lateral inhibition sp   19363474
Notch pathway regulation (5) Cap Broad delta-like veins, bent up (spoon-shaped) wing, wrinkled, small, ectopic bristles, supernumary trichomes np   19363474
Notch pathway regulation (6) Cap none np   19363474
Self-renewal and differentiation in neural stem cells Cap GFP aggregates number, GFP aggregates size, ganglion mother cell shorter lineages, neuroblast underproliferation, lethal sp   21549331
Notch pathway regulation (1) Cap Downregulation of Notch pathway np   20493818
Notch pathway regulation (2) Cap Lethal strong C96-GAL4 20493818
Notch pathway regulation (2) Cap Up- and downregulation of Notch pathway; wing disc NRE:EGFP: up, down; wing disc myrRFP: accumulation, reduced; lethal sp en-GAL4 20493818
Notch pathway regulation (2) Cap Upregulation of Notch pathway; wing disc NRE:EGFP: up; wing disc myrRFP: accumulation, reduced; lethal sp en-GAL4 20493818
Notch pathway regulation (2) Cap Wing disc NRE:EGFP: up; wing disc myrRFP: accumulation, reduced; lethal sp en-GAL4 20493818
Notch pathway regulation (3) Cap Upregulation of Notch pathway np   20493818
Adiposity regulation (1) Cap none -0.335   20074523
RTK-Ras-ERK pathway regulation (1) Cap none 0.87 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) Cap none -0.51 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) Cap Increased ERK phosphorylation after sSpitz and EGF stimulation 1.71 30 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) Cap Increased ERK phosphorylation after sSpitz and EGF stimulation 1.84 10 minutes sSpitz stimulation 22028469
Hippo pathway regulation Cap none -1.61   23263283
Glycosylation regulation (1) Cap none sp   21203496

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