modENCODE |  Help |  blog

Gene : sd D. melanogaster

DB identifier  ? FBgn0003345 Secondary Identifier  ? CG8544
Name  ? scalloped Source  FlyBase
  • synonyms:
  • FBgn0026840,
  • FBgn0027258,
  • sp,
  • FBgn0027225,
  • FBan0008544,
  • EP1088,
  • l(1)G0239,
  • FBgn0040146,
  • FBgn0062702,
  • spatula,
  • l(1)HF394,
  • EP(X)1088,
  • anon-EST:Liang-2.14,
  • FBgn0003345,
  • FBgn0027247,
  • l(1)G0315,
  • Scalloped,
  • TEAD,
  • FBgn0027221,
  • CG8544,
  • DROEXO2,
  • clone 2.14,
  • l(1)III,
  • FBgn0025967,
  • DROEXO,
  • SD,
  • l(1)G0262,
  • l(1)G0483,
  • l(1)G0309

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

208 Alleles

DB identifier Symbol Allele Class Organism
FBal0286246 sd[del]   Drosophila melanogaster
FBal0239883 sd[dsRNA.N.Scer\UAS]   Drosophila melanogaster
FBal0239884 sd[dsRNA.C.Scer\UAS]   Drosophila melanogaster
FBal0239885 sd[Scer\UAS.T:Ivir\HA1]   Drosophila melanogaster
FBal0239886 sd[DeltaB]   Drosophila melanogaster
FBal0239887 sd[DeltaC]   Drosophila melanogaster
FBal0239888 sd[GA.Scer\UAS.T:Scer\GAL4-GAD]   Drosophila melanogaster
FBal0211807 sd[CA07575]   Drosophila melanogaster
FBal0268817 sd[S278]   Drosophila melanogaster
FBal0240569 sd[Scer\UAS.T:Zzzz\FLAG]   Drosophila melanogaster
FBal0178065 sd[f06088]   Drosophila melanogaster
FBal0243940 sd[NP7148]   Drosophila melanogaster
FBal0178069 sd[d09376]   Drosophila melanogaster
FBal0178070 sd[d04263]   Drosophila melanogaster
FBal0035572 sd[109a]   Drosophila melanogaster
FBal0035581 sd[330a]   Drosophila melanogaster
FBal0035578 sd[232b]   Drosophila melanogaster
FBal0050465 sd[R-111]   Drosophila melanogaster
FBal0178064 sd[f06474]   Drosophila melanogaster
FBal0050470 sd[R-119]   Drosophila melanogaster
FBal0050479 sd[R-57]   Drosophila melanogaster
FBal0050480 sd[R-58]   Drosophila melanogaster
FBal0050483 sd[R-69]   Drosophila melanogaster
FBal0050484 sd[R-7]   Drosophila melanogaster
FBal0178066 sd[f04484]   Drosophila melanogaster
FBal0178067 sd[f04046]   Drosophila melanogaster
FBal0178068 sd[e02321]   Drosophila melanogaster
FBal0035560 sd[+239b]   Drosophila melanogaster
FBal0035561 sd[+253b]   Drosophila melanogaster
FBal0035562 sd[+263b]   Drosophila melanogaster

87 Clones

Secondary Identifier DB identifier
RP003676404 FBcl0483526
RP004474845 FBcl0484279
RP004384872 FBcl0484280
RP004479211 FBcl0484283
RP004219296 FBcl0484281
RP004485691 FBcl0484282
RP004502226 FBcl0484285
RP004528726 FBcl0484284
AT02767 FBcl0013103
EP15142 FBcl0076897
EN00159 FBcl0092537
EN00259 FBcl0092773
EN07353 FBcl0092775
EK269262 FBcl0124482
EK295227 FBcl0124500
EK294953 FBcl0124508
EK105804 FBcl0124580
EK174114 FBcl0128260
EK195712 FBcl0128294
EK259149 FBcl0128304
EK290248 FBcl0128312
EK206903 FBcl0128322
EK110054 FBcl0128326
EK220814 FBcl0128536
EK107807 FBcl0128550
EK234743 FBcl0128580
EK242637 FBcl0128600
EK256231 FBcl0128612
EK290129 FBcl0128632
EK249227 FBcl0128642

31 Exons

DB identifier Symbol
FBgn0003345:8 sd:8
FBgn0003345:12 sd:12
FBgn0003345:15 sd:15
FBgn0003345:18 sd:18
FBgn0003345:19 sd:19
FBgn0003345:20 sd:20
FBgn0003345:22 sd:22
FBgn0003345:23 sd:23
FBgn0003345:25 sd:25
FBgn0003345:26 sd:26
FBgn0003345:27 sd:27
FBgn0003345:29 sd:29
FBgn0003345:24 sd:24
FBgn0003345:17 sd:17
FBgn0003345:4 sd:4
FBgn0003345:14 sd:14
FBgn0003345:7 sd:7
FBgn0003345:13 sd:13
FBgn0003345:16 sd:16
FBgn0003345:21 sd:21
FBgn0003345:11 sd:11
FBgn0003345:28 sd:28
FBgn0003345:9 sd:9
FBgn0003345:3 sd:3
FBgn0003345:5 sd:5
FBgn0003345:6 sd:6
FBgn0003345:10 sd:10
FBgn0003345:31 sd:31
FBgn0003345:30 sd:30
FBgn0003345:2 sd:2

20 Transcripts

DB identifier Gene
FBtr0112825 sd
FBtr0310312 sd
FBtr0308131 sd
FBtr0112827 sd
FBtr0301543 sd
FBtr0074100 sd
FBtr0074099 sd
FBtr0308129 sd
FBtr0112826 sd
FBtr0074101 sd
FBtr0308128 sd
FBtr0308133 sd
FBtr0112824 sd
FBtr0301544 sd
FBtr0310311 sd
FBtr0308130 sd
FBtr0310313 sd
FBtr0308132 sd
FBtr0308134 sd
FBtr0340115 sd

40 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0074099-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0074100-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0074101-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0112824-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0112825-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0112826-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0112827-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0340115-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0301543-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0301544-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0310311-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0310312-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0310313-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0308128-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0308129-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0308130-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0308131-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0308132-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0308133-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0308134-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0074099-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0074100-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0074101-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0112824-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0112825-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0112826-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0112827-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0340115-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0301543-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0301544-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
32536 NCBI Entrez Gene identifiers FBgn0003345
58884 BioGRID FBgn0003345

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 2540.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 1478.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 1971.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 1510.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 2673.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 10710.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 3417.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 1994.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 1595.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 4744.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 2082.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 2525.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 3558.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 2462.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 2161.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 1951.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 3367.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 2017.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 2740.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 2390.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1527.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 1564.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 2636.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 2655.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 2786.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 1123.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 980.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 1912.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 2197.0
FBgn0003345 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 2659.0

40 Introns

DB identifier
Organism . Name
intron_FBgn0003345:8_FBgn0003345:12 Drosophila melanogaster
intron_FBgn0003345:12_FBgn0003345:15 Drosophila melanogaster
intron_FBgn0003345:15_FBgn0003345:18 Drosophila melanogaster
intron_FBgn0003345:18_FBgn0003345:19 Drosophila melanogaster
intron_FBgn0003345:19_FBgn0003345:20 Drosophila melanogaster
intron_FBgn0003345:20_FBgn0003345:22 Drosophila melanogaster
intron_FBgn0003345:22_FBgn0003345:23 Drosophila melanogaster
intron_FBgn0003345:23_FBgn0003345:25 Drosophila melanogaster
intron_FBgn0003345:25_FBgn0003345:26 Drosophila melanogaster
intron_FBgn0003345:26_FBgn0003345:27 Drosophila melanogaster
intron_FBgn0003345:27_FBgn0003345:29 Drosophila melanogaster
intron_FBgn0003345:8_FBgn0003345:18 Drosophila melanogaster
intron_FBgn0003345:22_FBgn0003345:24 Drosophila melanogaster
intron_FBgn0003345:24_FBgn0003345:25 Drosophila melanogaster
intron_FBgn0003345:8_FBgn0003345:14 Drosophila melanogaster
intron_FBgn0003345:14_FBgn0003345:18 Drosophila melanogaster
intron_FBgn0003345:7_FBgn0003345:15 Drosophila melanogaster
intron_FBgn0003345:8_FBgn0003345:15 Drosophila melanogaster
intron_FBgn0003345:7_FBgn0003345:13 Drosophila melanogaster
intron_FBgn0003345:13_FBgn0003345:18 Drosophila melanogaster
intron_FBgn0003345:8_FBgn0003345:11 Drosophila melanogaster
intron_FBgn0003345:11_FBgn0003345:14 Drosophila melanogaster
intron_FBgn0003345:27_FBgn0003345:28 Drosophila melanogaster
intron_FBgn0003345:9_FBgn0003345:13 Drosophila melanogaster
intron_FBgn0003345:8_FBgn0003345:13 Drosophila melanogaster
intron_FBgn0003345:27_FBgn0003345:31 Drosophila melanogaster
intron_FBgn0003345:7_FBgn0003345:18 Drosophila melanogaster
intron_FBgn0003345:27_FBgn0003345:30 Drosophila melanogaster
intron_FBgn0003345:1_FBgn0003345:5 Drosophila melanogaster
intron_FBgn0003345:5_FBgn0003345:18 Drosophila melanogaster

15 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage sd none -0.994007348   19067489
Lipid storage sd none 0.286748365   19067489
Lipid storage sd none -0.836698183   19067489
Lipid storage sd none 0.292057467   19067489
Cell size and cell-cycle regulation (1) sd none sp   16496002
Cell size and cell-cycle regulation (1) sd none sp   16496002
Dendrite pattern formation sd none np   16547170
Heat nociception (1) sd none -1.17   21074052
Notch pathway regulation (4) sd Notum malformation death 6   19363474
RTK-Ras-ERK pathway regulation (1) sd none 1.47 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) sd none -0.75 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) sd none 0.79 30 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) sd Increased ERK phosphorylation after sSpitz and EGF stimulation 1.98 10 minutes sSpitz stimulation 22028469
Hippo pathway regulation sd none -1.88   23263283
Glycosylation regulation (1) sd none sp   21203496

0 Submissions