Genomics
Gene Ontology Displayer
Homologue Displayer
Mod Mine G Browse Displayer
Overlapping Features Displayer
Regulatory Regions Displayer
9 Alleles
| DB identifier | Symbol | Allele Class | Organism |
|---|---|---|---|
| FBal0181277 | Tfb1[f06697] | Drosophila melanogaster | |
| FBal0181278 | Tfb1[f03351] | Drosophila melanogaster | |
| FBal0159671 | Tfb1[EY02347] | Drosophila melanogaster | |
| FBal0064687 | Tfb1[rO238] | Drosophila melanogaster | |
| FBal0064688 | Tfb1[k06203] | Drosophila melanogaster | |
| FBal0064689 | Tfb1[06950] | Drosophila melanogaster | |
| FBal0008121 | Tfb1[06949] | Drosophila melanogaster | |
| FBal0208771 | Tfb1[GD4074] | Drosophila melanogaster | |
| FBal0275873 | Tfb1[NIG.8151R] | Drosophila melanogaster |
44 Clones
9 Exons
| DB identifier | Symbol |
|---|---|
| FBgn0033929:1 | Tfb1:1 |
| FBgn0033929:4 | Tfb1:4 |
| FBgn0033929:6 | Tfb1:6 |
| FBgn0033929:7 | Tfb1:7 |
| FBgn0033929:8 | Tfb1:8 |
| FBgn0033929:9 | Tfb1:9 |
| FBgn0033929:2 | Tfb1:2 |
| FBgn0033929:3 | Tfb1:3 |
| FBgn0033929:5 | Tfb1:5 |
4 Transcripts
| DB identifier | Gene |
|---|---|
| FBtr0087550 | Tfb1 |
| FBtr0087549 | Tfb1 |
| FBtr0087548 | Tfb1 |
| FBtr0305616 | Tfb1 |
8 UTRs
| Class | DB identifier |
Organism . Name |
|---|---|---|
| FivePrimeUTR | FBtr0087548-5-prime-utr | Drosophila melanogaster |
| FivePrimeUTR | FBtr0087549-5-prime-utr | Drosophila melanogaster |
| FivePrimeUTR | FBtr0087550-5-prime-utr | Drosophila melanogaster |
| FivePrimeUTR | FBtr0305616-5-prime-utr | Drosophila melanogaster |
| ThreePrimeUTR | FBtr0087548-3-prime-utr | Drosophila melanogaster |
| ThreePrimeUTR | FBtr0087549-3-prime-utr | Drosophila melanogaster |
| ThreePrimeUTR | FBtr0087550-3-prime-utr | Drosophila melanogaster |
| ThreePrimeUTR | FBtr0305616-3-prime-utr | Drosophila melanogaster |
Other
26 Pathways
- RNA Polymerase II Transcription Elongation,
- Dual incision reaction in GG-NER,
- RNA Pol II CTD phosphorylation and interaction with CE,
- Formation of the Early Elongation Complex,
- Formation of RNA Pol II elongation complex,
- Transcription-coupled NER (TC-NER),
- Dual incision reaction in TC-NER,
- RNA Polymerase II Transcription Initiation,
- Gene Expression,
- mRNA Processing,
- RNA Polymerase II Transcription Initiation And Promoter Clearance,
- Nucleotide Excision Repair,
- RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription,
- RNA Polymerase II Pre-transcription Events,
- Formation of incision complex in GG-NER,
- Transcription,
- mRNA Capping,
- RNA Polymerase II Transcription Pre-Initiation And Promoter Opening,
- RNA Polymerase II Transcription,
- DNA Repair,
- RNA Polymerase I Chain Elongation,
- Global Genomic NER (GG-NER),
- RNA Polymerase I Promoter Clearance,
- RNA Polymerase I Promoter Escape,
- RNA Polymerase II Promoter Escape,
- RNA Polymerase I Transcription
2 Cross References
| Identifier |
Source . Name |
Subject . Primary Identifier |
|---|---|---|
| 36598 | NCBI Entrez Gene identifiers | FBgn0033929 |
| 62348 | BioGRID | FBgn0033929 |
11 Data Sets
| Name | URL |
|---|---|
| FlyBase data set for Drosophila melanogaster | |
| Swiss-Prot data set | http://ca.expasy.org/sprot |
| Drosophila 12 Genomes Consortium homology | |
| GenomeRNAi data set | |
| TreeFam data set | |
| Panther data set | |
| IntAct interactions data set | |
| BioGRID interaction data set | http://www.thebiogrid.org/downloads.php |
| GO Annotation from FlyBase | |
| FlyBase fasta data set for Drosophila melanogaster | |
| Drosophila Cell Line and Developmental Stage Gene and Exon Scores |
55 Expression Scores
9 Introns
29 RNAi Results
| Screen | Gene | Phenotype | Score | Conditions | PubMed ID |
|---|---|---|---|---|---|
| Lipid storage | Tfb1 | none | -3.961989729 | 19067489 | |
| Lipid storage | Tfb1 | none | -0.018201416 | 19067489 | |
| ERK signaling | Tfb1 | ERK activation increased | weak | 17086199 | |
| Wnt signaling | Tfb1 | Increased Wnt reporter activity | 3.3 | 15817814 | |
| Constitutive protein secretion and Golgi organization (1) | Tfb1 | Decreased horseradish peroxidase protein expression | sp | 16452979 | |
| Cell size and cell-cycle regulation (1) | Tfb1 | none | sp | 16496002 | |
| Dendrite pattern formation | Tfb1 | none | np | 16547170 | |
| Microtubule assembly and organization | Tfb1 | none | np | 18463163 | |
| Combinatorial effect with methyl methanesulphonate (1) | Tfb1 | Synthetic lethal with methyl methanesulphonate | sp | 19543366 | |
| Combinatorial effect with methyl methanesulphonate (2) | Tfb1 | Synthetic lethal with methyl methanesulphonate | sp | 19543366 | |
| Muscle morphogenesis and function (1) | Tfb1 | Lethal | np | 20220848 | |
| Muscle morphogenesis and function (1) | Tfb1 | none | np | 20220848 | |
| Heat nociception (1) | Tfb1 | Developmentally lethal | 0 | 21074052 | |
| Heat nociception (1) | Tfb1 | none | 0.49 | 21074052 | |
| Regulated secretory pathway biogenesis (1) | Tfb1 | none | 7 | 21149569 | |
| Regulated secretory pathway biogenesis (1) | Tfb1 | none | 0.2 | 21149569 | |
| Heart development and function (1) | Tfb1 | none | 1 | 20371351 | |
| Serratia marcescens infection (1) | Tfb1 | none | 0.111111111111111 | 19520911 | |
| Notch pathway regulation (4) | Tfb1 | Bristle morphology defects, notum malformation death | sp | 19363474 | |
| Notch pathway regulation (4) | Tfb1 | Bristle morphology defects, notum malformation death | sp | 19363474 | |
| Notch pathway regulation (1) | Tfb1 | Downregulation of Notch pathway | np | 20493818 | |
| Adiposity regulation (1) | Tfb1 | none | -0.416 | 20074523 | |
| RTK-Ras-ERK pathway regulation (1) | Tfb1 | none | -0.04 | 10 minutes EGF stimulation | 22028469 |
| RTK-Ras-ERK pathway regulation (1) | Tfb1 | none | -0.64 | 0 minutes EGF stimulation | 22028469 |
| RTK-Ras-ERK pathway regulation (2) | Tfb1 | none | 0.16 | 30 minutes sSpitz stimulation | 22028469 |
| RTK-Ras-ERK pathway regulation (2) | Tfb1 | none | 0.51 | 10 minutes sSpitz stimulation | 22028469 |
| Hippo pathway regulation | Tfb1 | none | -0.51 | 23263283 | |
| Srp/Lz-induced transcriptional activation | Tfb1 | Decreased Srp/Lz-induced transcription | -4.76 | 20368357 | |
| Glycosylation regulation (1) | Tfb1 | none | sp | 21203496 |
