modENCODE |  Help |  blog

Gene : CG12484 D. melanogaster

DB identifier  ? FBgn0086604 Secondary Identifier  ? CG12484
Source  FlyBase
  • synonyms:
  • CG30143,
  • FBgn0050143,
  • FBgn0034508,
  • FBan0033041,
  • FBan0030143,
  • FBgn0053041,
  • CT32777,
  • FBgn0086604,
  • 12484,
  • CG33041

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

17 Alleles

DB identifier Symbol Allele Class Organism
FBal0267481 CG12484[MI04810]   Drosophila melanogaster
FBal0267286 CG12484[MI04965]   Drosophila melanogaster
FBal0198393 CG12484[MB03736]   Drosophila melanogaster
FBal0185898 CG12484[f07081]   Drosophila melanogaster
FBal0185899 CG12484[f01463]   Drosophila melanogaster
FBal0185900 CG12484[f00884]   Drosophila melanogaster
FBal0185901 CG12484[f00806]   Drosophila melanogaster
FBal0192469 CG12484[MB03693]   Drosophila melanogaster
FBal0131648 CG12484[EP2424]   Drosophila melanogaster
FBal0284905 CG12484[MI09152]   Drosophila melanogaster
FBal0199824 CG12484[GD10005]   Drosophila melanogaster
FBal0266692 CG12484[MI04951]   Drosophila melanogaster
FBal0213420 CG12484[GD14310]   Drosophila melanogaster
FBal0213421 CG12484[GD2568]   Drosophila melanogaster
FBal0222664 CG12484[f01304]   Drosophila melanogaster
FBal0271257 CG12484[NIG.12484R]   Drosophila melanogaster
FBal0237370 CG12484[KK111351]   Drosophila melanogaster

13 Clones

Secondary Identifier DB identifier
EK185722 FBcl0047128
EK014858 FBcl0047140
RH73613 FBcl0252699
IP12366 FBcl0293296
IP16849 FBcl0317536
IP12166 FBcl0346693
IP17049 FBcl0340004
IP12066 FBcl0346692
IP17149 FBcl0346694
DMG3-chr2R.4501.pred.a FBcl0362316
DMG4-chr2R.28.005.pred.a FBcl0384081
CK01.14B.G4 FBcl0468822
60979 FBcl0468821

23 Exons

DB identifier Symbol
FBgn0086604:1 CG12484:1
FBgn0086604:2 CG12484:2
FBgn0086604:3 CG12484:3
FBgn0086604:4 CG12484:4
FBgn0086604:5 CG12484:5
FBgn0086604:6 CG12484:6
FBgn0086604:7 CG12484:7
FBgn0086604:8 CG12484:8
FBgn0086604:9 CG12484:9
FBgn0086604:10 CG12484:10
FBgn0086604:11 CG12484:11
FBgn0086604:12 CG12484:12
FBgn0086604:13 CG12484:13
FBgn0086604:14 CG12484:14
FBgn0086604:15 CG12484:15
FBgn0086604:17 CG12484:17
FBgn0086604:16 CG12484:16
FBgn0086604:18 CG12484:18
FBgn0086604:20 CG12484:20
FBgn0086604:21 CG12484:21
FBgn0086604:22 CG12484:22
FBgn0086604:23 CG12484:23
FBgn0086604:19 CG12484:19

4 Transcripts

DB identifier Gene
FBtr0112775 CG12484
FBtr0273284 CG12484
FBtr0112774 CG12484
FBtr0342690 CG12484

8 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0112774-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0112775-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0273284-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0342690-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0112774-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0112775-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0273284-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0342690-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

0 Pathways

1 Cross References

Identifier
Source . Name

Subject . Primary Identifier
37310 NCBI Entrez Gene identifiers FBgn0086604

9 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 211.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 217.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 308.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 291.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 176.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 124.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 157.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 181.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 156.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 206.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 138.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 183.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 142.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 270.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 129.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 209.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 138.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 196.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 177.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 125.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 159.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 117.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 168.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 88.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 142.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 338.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 161.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 173.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 137.0
FBgn0086604 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 129.0

24 Introns

DB identifier
Organism . Name
intron_FBgn0086604:1_FBgn0086604:2 Drosophila melanogaster
intron_FBgn0086604:2_FBgn0086604:4 Drosophila melanogaster
intron_FBgn0086604:4_FBgn0086604:5 Drosophila melanogaster
intron_FBgn0086604:5_FBgn0086604:6 Drosophila melanogaster
intron_FBgn0086604:6_FBgn0086604:7 Drosophila melanogaster
intron_FBgn0086604:7_FBgn0086604:8 Drosophila melanogaster
intron_FBgn0086604:8_FBgn0086604:9 Drosophila melanogaster
intron_FBgn0086604:9_FBgn0086604:10 Drosophila melanogaster
intron_FBgn0086604:10_FBgn0086604:11 Drosophila melanogaster
intron_FBgn0086604:11_FBgn0086604:12 Drosophila melanogaster
intron_FBgn0086604:12_FBgn0086604:13 Drosophila melanogaster
intron_FBgn0086604:13_FBgn0086604:14 Drosophila melanogaster
intron_FBgn0086604:14_FBgn0086604:15 Drosophila melanogaster
intron_FBgn0086604:15_FBgn0086604:19 Drosophila melanogaster
intron_FBgn0086604:19_FBgn0086604:20 Drosophila melanogaster
intron_FBgn0086604:20_FBgn0086604:21 Drosophila melanogaster
intron_FBgn0086604:21_FBgn0086604:22 Drosophila melanogaster
intron_FBgn0086604:22_FBgn0086604:23 Drosophila melanogaster
intron_FBgn0086604:2_FBgn0086604:3 Drosophila melanogaster
intron_FBgn0086604:3_FBgn0086604:4 Drosophila melanogaster
intron_FBgn0086604:15_FBgn0086604:17 Drosophila melanogaster
intron_FBgn0086604:15_FBgn0086604:16 Drosophila melanogaster
intron_FBgn0086604:16_FBgn0086604:18 Drosophila melanogaster
intron_FBgn0086604:18_FBgn0086604:20 Drosophila melanogaster

21 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage CG12484 none -0.65874874   19067489
Lipid storage CG12484 none -1.526584301   19067489
Lipid storage CG12484 none 1.217522518   19067489
Lipid storage CG12484 none 0.627292694   19067489
Lipid storage CG12484 none -0.454485186   19067489
Lipid storage CG12484 none -0.135449115   19067489
Lipid storage CG12484 none -0.00600357   19067489
Lipid storage CG12484 none 1.419506241   19067489
Lipid storage CG12484 none -0.002456622   19067489
Lipid storage CG12484 none 0.024953506   19067489
Cell size and cell-cycle regulation (1) CG12484 none sp   16496002
Ca2+ channel regulation CG12484 Decreased Ca2+ influx 3   16645049
Heat nociception (1) CG12484 none -1.17   21074052
Serratia marcescens infection (1) CG12484 none -0.233333333333333   19520911
Notch pathway regulation (4) CG12484 Gain of bristles, lateral inhibition sp   19363474
Notch pathway regulation (4) CG12484 Gain of bristles, notum malformation death, lateral inhibition sp   19363474
Notch pathway regulation (5) CG12484 Bent up (spoon-shaped) wing np   19363474
Adiposity regulation (1) CG12484 none -0.185   20074523
Hippo pathway regulation CG12484 none -1.46   23263283
Hippo pathway regulation CG12484 none 0.59   23263283
Glycosylation regulation (1) CG12484 none sp   21203496

0 Submissions