modENCODE |  Help |  blog

Gene : Sp1 D. melanogaster

DB identifier  ? FBgn0020378 Secondary Identifier  ? CG1343
Name  ? Sp1 Source  FlyBase
  • synonyms:
  • SP1,
  • FBan0001343,
  • D-Sp1,
  • D.Sp1,
  • FBgn0020378,
  • dSp1,
  • D-Sp8,
  • CG1343

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

9 Alleles

DB identifier Symbol Allele Class Organism
FBal0267375 Sp1[L.Scer\UAS]   Drosophila melanogaster
FBal0259649 Sp1[KK108285]   Drosophila melanogaster
FBal0268871 Sp1[T:Avic\GFP-EGFP]   Drosophila melanogaster
FBal0103958 Sp1[btd.PS]   Drosophila melanogaster
FBal0155796 Sp1[dsRNA.Scer\UAS]   Drosophila melanogaster
FBal0103959 Sp1[Scer\UAS.cSa]   Drosophila melanogaster
FBal0263430 Sp1[HMS01526]   Drosophila melanogaster
FBal0208586 Sp1[GD4097]   Drosophila melanogaster
FBal0271559 Sp1[NIG.1343R]   Drosophila melanogaster

30 Clones

Secondary Identifier DB identifier
EP00650 FBcl0076373
EK249447 FBcl0113226
EK147843 FBcl0113234
EK103239 FBcl0113244
EK145043 FBcl0113252
EK293157 FBcl0113260
EK297205 FBcl0113446
EK216354 FBcl0113644
EK262428 FBcl0113792
RE29529 FBcl0195005
RE10016 FBcl0195010
RH05965 FBcl0242351
RH05953 FBcl0242442
RH61885 FBcl0242504
RH07968 FBcl0242513
RH07669 FBcl0242515
CK01.168B.B6 FBcl0420576
IP18557 FBcl0317371
IP18457 FBcl0318399
CK01.42C.F1 FBcl0420536
CK01.112A.H3 FBcl0420561
RP004113439 FBcl0497561
RP004339568 FBcl0497562
37100 FBcl0420524
34669 FBcl0420504
214311.19 FBcl0420512
159585 FBcl0420617
146476 FBcl0420588
82625 FBcl0420603
190792 FBcl0420631

8 Exons

DB identifier Symbol
FBgn0020378:1 Sp1:1
FBgn0020378:4 Sp1:4
FBgn0020378:6 Sp1:6
FBgn0020378:3 Sp1:3
FBgn0020378:5 Sp1:5
FBgn0020378:8 Sp1:8
FBgn0020378:2 Sp1:2
FBgn0020378:7 Sp1:7

4 Transcripts

DB identifier Gene
FBtr0071381 Sp1
FBtr0310290 Sp1
FBtr0273354 Sp1
FBtr0331335 Sp1

8 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0071381-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0273354-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0310290-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0331335-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0071381-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0273354-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0310290-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0331335-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
31913 NCBI Entrez Gene identifiers FBgn0020378
58351 BioGRID FBgn0020378

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 394.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 514.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 214.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 120.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 71.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 126.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 286.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 234.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 167.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 230.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 274.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 62.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 67.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 159.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 166.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 4606.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 123.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 236.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 52.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 152.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 385.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 145.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 268.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 254.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 60.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 337.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 180.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 393.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 573.0
FBgn0020378 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 979.0

7 Introns

DB identifier
Organism . Name
intron_FBgn0020378:2_FBgn0020378:4 Drosophila melanogaster
intron_FBgn0020378:4_FBgn0020378:5 Drosophila melanogaster
intron_FBgn0020378:5_FBgn0020378:7 Drosophila melanogaster
intron_FBgn0020378:1_FBgn0020378:4 Drosophila melanogaster
intron_FBgn0020378:4_FBgn0020378:6 Drosophila melanogaster
intron_FBgn0020378:3_FBgn0020378:5 Drosophila melanogaster
intron_FBgn0020378:5_FBgn0020378:8 Drosophila melanogaster

18 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Sp1 none 1.578060889   19067489
Lipid storage Sp1 none 2.267072809   19067489
Lipid storage Sp1 none 0.020169363   19067489
Dendrite pattern formation Sp1 none np   16547170
Lipid storage Sp1 Smaller sized lipid droplets, more dispersed strong   18408709
Muscle morphogenesis and function (1) Sp1 none np   20220848
Muscle morphogenesis and function (1) Sp1 none np   20220848
Heat nociception (1) Sp1 none -1.17   21074052
Heat nociception (1) Sp1 none -0.7   21074052
Heart development and function (1) Sp1 none 1   20371351
Serratia marcescens infection (1) Sp1 none 0.272727272727272   19520911
Notch pathway regulation (4) Sp1 none 0   19363474
Notch pathway regulation (4) Sp1 none 0   19363474
Adiposity regulation (1) Sp1 none -0.077   20074523
Blood cell homeostasis regulation (1) Sp1 none np   20540764
Blood cell homeostasis regulation (2) Sp1 none np   20540764
Hippo pathway regulation Sp1 none 1.25   23263283
Glycosylation regulation (1) Sp1 none sp   21203496

0 Submissions