modENCODE |  Help |  blog

Gene : RpLP0 D. melanogaster

DB identifier  ? FBgn0000100 Secondary Identifier  ? CG7490
Name  ? Ribosomal protein LP0 Source  FlyBase
  • synonyms:
  • RpP0,
  • AP3,
  • Ape,
  • P35,
  • 60S ribosomal protein P0,
  • Rplp0,
  • ACIDIC RIBOSOMAL PROTEIN LP0,
  • RLA0,
  • l(3)01544,
  • RPL P0,
  • PO,
  • RpPO,
  • P0,
  • FBan0007490,
  • CG7490,
  • FBgn0010752,
  • Apurinic endonuclease 3,
  • l(3)0154,
  • LP0,
  • Ribosomal protein P0,
  • FBgn0000100

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

14 Alleles

DB identifier Symbol Allele Class Organism
FBal0245626 RpLP0[JF01335]   Drosophila melanogaster
FBal0181796 RpLP0[d09567]   Drosophila melanogaster
FBal0009416 RpLP0[01544] hypermorphic allele - genetic evidence, gain of function allele Drosophila melanogaster
FBal0094618 RpLP0[36]   Drosophila melanogaster
FBal0094617 RpLP0[8]   Drosophila melanogaster
FBal0094619 RpLP0[306] loss of function allele Drosophila melanogaster
FBal0094616 RpLP0[rev] wild-type allele Drosophila melanogaster
FBal0287274 RpLP0[Scer\UAS.ORF]   Drosophila melanogaster
FBal0287275 RpLP0[Scer\UAS.ORF.T:Ivir\HA1]   Drosophila melanogaster
FBal0208364 RpLP0[GD13189]   Drosophila melanogaster
FBal0216533 RpLP0[DP00460]   Drosophila melanogaster
FBal0228935 RpLP0[UM-8046-3]   Drosophila melanogaster
FBal0228936 RpLP0[c05892]   Drosophila melanogaster
FBal0228937 RpLP0[NP2385]   Drosophila melanogaster

748 Clones

Secondary Identifier DB identifier
AT30071 FBcl0359160
RE10907 FBcl0359183
RE19255 FBcl0359195
RE24609 FBcl0359201
RE33127 FBcl0359207
RE41837 FBcl0359213
RE38518 FBcl0359219
RE43885 FBcl0359241
RE54160 FBcl0359253
RH63312 FBcl0359282
RH35416 FBcl0359288
RH08195 FBcl0359317
RH09076 FBcl0359324
UUGC0412 FBcl0001335
AT24054 FBcl0025651
AT10746 FBcl0025697
AT10321 FBcl0025787
EC18147 FBcl0068759
EN07038 FBcl0096935
EN06844 FBcl0097597
EN12064 FBcl0097601
GH19581 FBcl0122587
GH03750 FBcl0122599
GH03413 FBcl0122603
GH02153 FBcl0122613
GH02053 FBcl0122619
GH05875 FBcl0122651
GH11041 FBcl0122657
GH04142 FBcl0122661
GH06043 FBcl0122663

5 Exons

DB identifier Symbol
FBgn0000100:3 RpLP0:3
FBgn0000100:4 RpLP0:4
FBgn0000100:5 RpLP0:5
FBgn0000100:1 RpLP0:1
FBgn0000100:2 RpLP0:2

2 Transcripts

DB identifier Gene
FBtr0334113 RpLP0
FBtr0078481 RpLP0

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0078481-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0334113-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0078481-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0334113-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

49 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
40451 NCBI Entrez Gene identifiers FBgn0000100
65690 BioGRID FBgn0000100

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 10964.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 14243.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 13443.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 14624.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 12746.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 14316.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 8282.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 12019.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 10221.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 8222.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 9600.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 14870.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 10320.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 13812.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 12254.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 13812.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 9192.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 8724.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 14887.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 9052.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 12773.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 8797.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 7229.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 5689.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 5943.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 10865.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 10212.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 7816.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 7639.0
FBgn0000100 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 8401.0

4 Introns

DB identifier
Organism . Name
intron_FBgn0000100:1_FBgn0000100:2 Drosophila melanogaster
intron_FBgn0000100:2_FBgn0000100:4 Drosophila melanogaster
intron_FBgn0000100:4_FBgn0000100:5 Drosophila melanogaster
intron_FBgn0000100:3_FBgn0000100:4 Drosophila melanogaster

34 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage RpLP0 Increased lipid droplet area 5.687325288   19067489
Lipid storage RpLP0 Increased lipid droplet area 2.246933654   19067489
Lipid storage RpLP0 none -0.596590583   19067489
Lipid storage RpLP0 none 6.793248919   19067489
ERK signaling RpLP0 ERK activation reduced weak   17086199
Drosophila C virus infection RpLP0 Drosophila C virus replication down np   17040126
Intracellular Listeria monocytogenes infection RpLP0 Increased GFP protein expression moderate   16020693
Drosophila C virus infection RpLP0 Drosophila C virus infection reduced np   15713840
Hedgehog signaling RpLP0 Decreased Hedgehog reporter activity -2.22   16311596
Constitutive protein secretion and Golgi organization (1) RpLP0 Decreased horseradish peroxidase protein expression sp   16452979
Cell size and cell-cycle regulation (1) RpLP0 Increased G1 DNA content, decreased G2 DNA content, decreased viability sp   16496002
Cell size and cell-cycle regulation (2) RpLP0 none 1.058   16496002
Cell size and cell-cycle regulation (3) RpLP0 none 474   16496002
Candida albicans phagocytosis (1) RpLP0 none np   16336044
Lipid storage RpLP0 Normal/larger sized lipid droplets, highly condensed strong   18408709
Combinatorial effect with methyl methanesulphonate (2) RpLP0 none sp   19543366
Muscle morphogenesis and function (1) RpLP0 Lethal np   20220848
Muscle morphogenesis and function (1) RpLP0 Lethal np   20220848
Muscle morphogenesis and function (3) RpLP0 none np   20220848
Heat nociception (1) RpLP0 Developmentally lethal 0   21074052
Heat nociception (1) RpLP0 Developmentally lethal 0   21074052
Heart development and function (1) RpLP0 Larval lethal 0.2   20371351
Serratia marcescens infection (1) RpLP0 none 0.114285714285714   19520911
Notch pathway regulation (4) RpLP0 Completely lethal (before pupal) sp   19363474
Notch pathway regulation (4) RpLP0 Completely lethal (before pupal) sp   19363474
Hh pathway regulation RpLP0 Downregulation of Hh pathway -0.603276465455767   17903264
Hh pathway regulation RpLP0 Downregulation of Hh pathway -0.594623359051108   17903264
Notch pathway regulation (1) RpLP0 Downregulation of Notch pathway np   20493818
Adiposity regulation (1) RpLP0 none -0.249   20074523
RTK-Ras-ERK pathway regulation (1) RpLP0 Increased ERK phosphorylation after EGF stimulation 2.91 0 minutes EGF stimulation 22028469

0 Submissions