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Gene : Rab4 D. melanogaster

DB identifier  ? FBgn0016701 Secondary Identifier  ? CG4921
Name  ? Rab4 Source  FlyBase
  • synonyms:
  • CG4921,
  • CG 4921,
  • FBan0004921,
  • FBgn0016701,
  • RAB4c,
  • Rab-protein 4,
  • DRAB4,
  • DmRab4,
  • Q7KY04,
  • rab4

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16 Alleles

DB identifier Symbol Allele Class Organism
FBal0248959 Rab4[S22N.Scer\UAS]   Drosophila melanogaster
FBal0285011 Rab4[tub.T:Disc\RFP-mCherry]   Drosophila melanogaster
FBal0182050 Rab4[f01260]   Drosophila melanogaster
FBal0257764 Rab4[HMS01100]   Drosophila melanogaster
FBal0156004 Rab4[Scer\UAS.T:Disc\RFP]   Drosophila melanogaster
FBal0190497 Rab4[SN.Scer\FRT.Scer\UAS]   Drosophila melanogaster
FBal0190206 Rab4[SN.Scer\UAS]   Drosophila melanogaster
FBal0208208 Rab4[GD11472]   Drosophila melanogaster
FBal0215390 Rab4[S22N.Scer\UAS.P\T.T:Avic\GFP-YFP]   Drosophila melanogaster
FBal0215389 Rab4[Scer\UAS.P\T.T:Avic\GFP-YFP]   Drosophila melanogaster
FBal0215391 Rab4[Q67L.Scer\UAS.P\T.T:Avic\GFP-YFP]   Drosophila melanogaster
FBal0247436 Rab4[SN.Scer\UAS.cTa]   Drosophila melanogaster
FBal0230513 Rab4[Ubi-p63E.T:Avic\GFP-EGFP]   Drosophila melanogaster
FBal0235815 Rab4[KK108784]   Drosophila melanogaster
FBal0258565 Rab4[Scer\UAS.T:Avic\GFP-EGFP]   Drosophila melanogaster
FBal0274438 Rab4[NIG.4921R]   Drosophila melanogaster

50 Clones

Secondary Identifier DB identifier
ESG019a.E21_H09 FBcl0000730
EC39731 FBcl0067091
EN05422 FBcl0095679
EN13137 FBcl0095683
GH18176 FBcl0119819
EK007554 FBcl0139032
EK143616 FBcl0139404
EK053417 FBcl0139642
EK008819 FBcl0139810
EK010401 FBcl0139830
EK234957 FBcl0139884
EK188105 FBcl0139924
EK044634 FBcl0139964
EK073206 FBcl0140002
HL03558 FBcl0149712
HL02434 FBcl0149713
LD16736 FBcl0156671
RE29980 FBcl0216063
RE70688 FBcl0216066
RE44973 FBcl0216069
RE71627 FBcl0216075
RE40706 FBcl0216078
RE68380 FBcl0216130
RH03163 FBcl0257678
RH01742 FBcl0257679
RH02976 FBcl0257680
RH01354 FBcl0257684
RH40359 FBcl0257686
SD04384 FBcl0283515
SD13042 FBcl0283533

7 Exons

DB identifier Symbol
FBgn0016701:1 Rab4:1
FBgn0016701:3 Rab4:3
FBgn0016701:4 Rab4:4
FBgn0016701:5 Rab4:5
FBgn0016701:6 Rab4:6
FBgn0016701:2 Rab4:2
FBgn0016701:7 Rab4:7

2 Transcripts

DB identifier Gene
FBtr0086829 Rab4
FBtr0086830 Rab4

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0086829-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0086830-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0086829-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0086830-3-prime-utr Drosophila melanogaster

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Other

0 Pathways

3 Cross References

Identifier
Source . Name

Subject . Primary Identifier
7354422 NCBI Entrez Gene identifiers FBgn0016701
36992 NCBI Entrez Gene identifiers FBgn0016701
62680 BioGRID FBgn0016701

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 1982.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 1485.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 1184.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 1589.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 1373.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 1187.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1552.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 1198.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 946.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 1999.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 1526.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 941.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1390.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 985.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 1127.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 854.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1427.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 853.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 1210.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 1137.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1173.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 2287.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 1382.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 2771.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 1491.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 1696.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 625.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 575.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 580.0
FBgn0016701 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 761.0

6 Introns

DB identifier
Organism . Name
intron_FBgn0016701:1_FBgn0016701:3 Drosophila melanogaster
intron_FBgn0016701:3_FBgn0016701:4 Drosophila melanogaster
intron_FBgn0016701:4_FBgn0016701:5 Drosophila melanogaster
intron_FBgn0016701:5_FBgn0016701:6 Drosophila melanogaster
intron_FBgn0016701:2_FBgn0016701:4 Drosophila melanogaster
intron_FBgn0016701:5_FBgn0016701:7 Drosophila melanogaster

15 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Rab4 none -0.616694209   19067489
Lipid storage Rab4 none 0.903071543   19067489
Lipid storage Rab4 none 0.121667844   19067489
Lipid storage Rab4 none -0.674426813   19067489
L. monocytogenes infection Rab4 Fewer infected cells **   16157870
Cell size and cell-cycle regulation (1) Rab4 none sp   16496002
Muscle morphogenesis and function (1) Rab4 none np   20220848
Heat nociception (1) Rab4 none -0.73   21074052
Heart development and function (1) Rab4 none 1   20371351
Serratia marcescens infection (1) Rab4 none -1.25842696629213   19520911
Notch pathway regulation (4) Rab4 none 0   19363474
Adiposity regulation (1) Rab4 none 1.737   20074523
Wnt proteins secretion Rab4 none -0.3   22094269
Hippo pathway regulation Rab4 none -0.47   23263283
Glycosylation regulation (1) Rab4 none sp   21203496

0 Submissions