modENCODE |  Help |  blog

Gene : CG4729 D. melanogaster

DB identifier  ? FBgn0036623 Secondary Identifier  ? CG4729
Source  FlyBase
  • synonyms:
  • CG4729,
  • FBgn0036623,
  • FBan0004729

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

7 Alleles

DB identifier Symbol Allele Class Organism
FBal0156965 CG4729[EY02120]   Drosophila melanogaster
FBal0161375 CG4729[EY13891]   Drosophila melanogaster
FBal0161374 CG4729[f05465]   Drosophila melanogaster
FBal0204388 CG4729[GD2491]   Drosophila melanogaster
FBal0204389 CG4729[GD16262]   Drosophila melanogaster
FBal0238877 CG4729[DP01387]   Drosophila melanogaster
FBal0274352 CG4729[NIG.4729R]   Drosophila melanogaster

70 Clones

Secondary Identifier DB identifier
ESG0117a.B21_C05 FBcl0002485
EK296322 FBcl0048348
EK127263 FBcl0048356
EK266460 FBcl0048372
CK02639 FBcl0059135
EN01151 FBcl0092335
GH25976 FBcl0106565
GH22114 FBcl0107629
GM12801 FBcl0144539
GM27701 FBcl0144540
GM19319 FBcl0144545
LD04208 FBcl0150999
LD16281 FBcl0152679
LD34004 FBcl0164815
LD47882 FBcl0164838
LD35968 FBcl0165037
LD43993 FBcl0165199
LD36449 FBcl0165206
LD36187 FBcl0165212
LP01180 FBcl0181199
LP12082 FBcl0181210
RE70138 FBcl0192039
RE08177 FBcl0193227
RE10487 FBcl0193462
RE32249 FBcl0195156
RE10780 FBcl0196739
RE69681 FBcl0196775
RE35485 FBcl0198637
RE52809 FBcl0198685
RH04237 FBcl0240147

9 Exons

DB identifier Symbol
FBgn0036623:9 CG4729:9
FBgn0036623:8 CG4729:8
FBgn0036623:5 CG4729:5
FBgn0036623:4 CG4729:4
FBgn0036623:2 CG4729:2
FBgn0036623:1 CG4729:1
FBgn0036623:7 CG4729:7
FBgn0036623:6 CG4729:6
FBgn0036623:3 CG4729:3

5 Transcripts

DB identifier Gene
FBtr0075417 CG4729
FBtr0308819 CG4729
FBtr0075419 CG4729
FBtr0075418 CG4729
FBtr0075420 CG4729

10 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0075417-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0075418-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0075419-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0075420-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0308819-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0075417-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0075418-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0075419-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0075420-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0308819-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
39820 NCBI Entrez Gene identifiers FBgn0036623
65127 BioGRID FBgn0036623

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 1775.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 1846.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 1094.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 972.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 845.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 729.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1603.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 1760.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 1054.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 1272.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 1553.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 669.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 710.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 775.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 1353.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 1091.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1876.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 981.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 572.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 1345.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1085.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 1815.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 1164.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 1069.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 809.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 1485.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 1060.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 819.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 895.0
FBgn0036623 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 799.0

8 Introns

DB identifier
Organism . Name
intron_FBgn0036623:9_FBgn0036623:5 Drosophila melanogaster
intron_FBgn0036623:5_FBgn0036623:4 Drosophila melanogaster
intron_FBgn0036623:4_FBgn0036623:2 Drosophila melanogaster
intron_FBgn0036623:2_FBgn0036623:1 Drosophila melanogaster
intron_FBgn0036623:7_FBgn0036623:5 Drosophila melanogaster
intron_FBgn0036623:6_FBgn0036623:5 Drosophila melanogaster
intron_FBgn0036623:8_FBgn0036623:5 Drosophila melanogaster
intron_FBgn0036623:3_FBgn0036623:2 Drosophila melanogaster

19 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage CG4729 none 0.082016462   19067489
Lipid storage CG4729 none 0.159908682   19067489
Lipid storage CG4729 none -2.249092591   19067489
Cell size and cell-cycle regulation (1) CG4729 none sp   16496002
Muscle morphogenesis and function (1) CG4729 Flightless np   20220848
Muscle morphogenesis and function (4) CG4729 Frayed myofibrils np   20220848
Heat nociception (1) CG4729 none -0.58   21074052
Heat nociception (1) CG4729 none -1.17   21074052
Heart development and function (1) CG4729 none 1   20371351
Serratia marcescens infection (1) CG4729 none -0.635294117647058   19520911
Serratia marcescens infection (1) CG4729 none -0.431818181818181   19520911
Notch pathway regulation (4) CG4729 none 0   19363474
Notch pathway regulation (4) CG4729 none 0   19363474
Notch pathway regulation (4) CG4729 none 0   19363474
PGN-induced dJNK phosphorylation CG4729 Increased P-JNK protein expression with PGN 4.19 15 min PGN induction 19893628
PGN-induced dJNK phosphorylation CG4729 Increased P-JNK protein expression with PGN 4.63 60 min PGN induction 19893628
Adiposity regulation (1) CG4729 none -0.323   20074523
Hippo pathway regulation CG4729 none -0.17   23263283
Glycosylation regulation (1) CG4729 none sp   21203496

0 Submissions